Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq2516 212 7e-50 seq2261 116 4e-21 >seq2516 Length=21774 Score = 212 bits (234), Expect = 7e-50 Identities = 160/187 (86%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 43722 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 43781 || ||||| ||||||||||||||||| |||||||| ||||| ||| || || ||| || Sbjct 1782 GGCGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACCCTGCTGGACGCGGTTGAG 1841 Query 43782 CATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 43841 ||||||||||||||||||||||||||||| ||||| ||||| || || || ||||| ||| Sbjct 1842 CATCCGGAAAAATATCCGCAGCTGACCATTCGTGTTTCCGGCTACGCGGTACGCTTCAAC 1901 Query 43842 TCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGGACATTTACCGAGAGTCTATAA 43901 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct 1902 TCTCTGACGCCGGAACAGCAGCGCGACGTAATCGCCCGTACCTTTACCGAAAGCCTGTAA 1961 Query 43902 TGGCTAA 43908 |||||| Sbjct 1962 -GGCTAA 1967 >seq2261 Length=3986 Score = 116 bits (128), Expect = 4e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 43722 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 43781 |||||||| ||||||||||| ||||| || || |||| ||| || || | | Sbjct 508 GGTGGTCAGCACCTGAACGTGAACGTCATGAACCGCGAAATGCTGCTCGACGCGATGGAA 567 Query 43782 CATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 43841 | ||||||||||||||||||||||||||||||||||| || || || || || |||||| Sbjct 568 AACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGTTTTAAC 627 Query 43842 TCTCTGACTCCGGAACAGCAGCGCGACGTTAT 43873 || ||||| |||||||||| || ||||| Sbjct 628 TCCCTGACCAAAGAACAGCAGCAGGATGTTAT 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540986652248560