Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq471 89.7 9e-13 seq1796 84.2 4e-11 >seq471 Length=15773 Score = 89.7 bits (98), Expect = 9e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| | |||||||||| ||||||||||| ||||||| ||||||||| Sbjct 7903 GCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAAT 7844 Query 133023 CCCTCCCCCGCATCCAC 133039 || |||||||| |||| Sbjct 7843 CCGGCCCCCGCAACCAC 7827 >seq1796 Length=2160 Score = 84.2 bits (92), Expect = 4e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || ||||| |||||||||| |||||||||| ||||||||||| ||||||| |||||| Sbjct 875 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 816 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| | |||||| ||| Sbjct 815 AATCCGGCTCCCGCAACCA 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895450340022840