Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq13335 288 2e-72 seq1043 156 8e-33 >seq13335 Length=4250 Score = 288 bits (318), Expect = 2e-72 Identities = 722/1078 (67%), Gaps = 43/1078 (4%) Strand=Plus/Plus Query 213297 AACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG 213356 || || || ||||| || |||| || || ||||| || | ||| | || ||| || || Sbjct 1802 AAGACGTCGGCCAGACCTTGGATGCCAATACCGATTGGGCGGTGACGCATGTTGGAGGTG 1861 Query 213357 -GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGC 213415 | || || || ||||| |||| | ||||||||||||||||||||| || ||| Sbjct 1862 CGTGCT-TCGGGCACAGGGTAGTAGTTACGGTCGATGATCTTGTTGAGGTTACGTGTGAT 1920 Query 213416 CACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG----------TAGCCCCCGT 213465 | ||||| || | ||||| | ||| | ||| || | || || | Sbjct 1921 CGTCTTGGTCACCTCAAACAGGTGTTGGTGGTCAAACTCGGCGGTTGTTGTTGCTCCATT 1980 Query 213466 -----CCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC 213517 ||||| ||||||| ||||| || || || |||||||| || |||||||| Sbjct 1981 GGACACCTGCTTGACAAACTTGGGCAGTGCAATCGATGCAAGGTTGCAGACAGCCACCTC 2040 Query 213518 CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAG 213577 || | ||||||| ||||||||||||||||||||||| | ||| ||||| || Sbjct 2041 CTCTGGCGACGTGTACTGGATGATCTCGGTGCACAGGTTGCTCGACGAGATAGTGCCGAG 2100 Query 213578 GTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGT 213637 |||||| ||||| ||||| | ||| || |||||||| || ||||| |||| || || Sbjct 2101 GTTCTGTTGGTTGGACTTGCCATTGCACGAGTCCTTGTATAGGATGTACGGGGTGCCTGT 2160 Query 213638 CTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCC-TG 213695 ||| | ||||||| | || ||| | ||| |||| | || ||||||| || | || Sbjct 2161 CTCGATCTGGGACTCGAGGATCGAGAACCACAGGT-CTTGTGCCTTGATGGTGCGGCGTG 2219 Query 213696 ACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 || ||||| || || ||||| | |||||| |||||||| | | ||||||| Sbjct 2220 CGAGG-CCGGGTGTCGCTTCGTAGCGCAGGTAGAGTTCGTTGAACTTCTCGCCCCAGGTG 2278 Query 213756 CTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGAC 213814 | | || || || | | |||| || | ||| |||||| ||| | || Sbjct 2279 TCGGCAAGGCCTGGCGCCTCGTTCGGG-CAGAAGAGTGACCAGTCGGCGTTGGCCTCAAC 2337 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | |||||| |||| ||| | || ||| || ||| ||| ||||| | | | | |||| Sbjct 2338 GCGCTGCATAAACAAGTCAGAGATCCAGAGTGCGTAGAAGAGGTCGCGAGCACGCATCTC 2397 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| || ||| |||||||| || || || || | |||||| |||||||| ||||| Sbjct 2398 CTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCCATGATGTCGGCGTGCCATGGCTC 2457 Query 213935 CATGTAGATGGCAAAGGCGCCCGGCCTCTTGCCG---CCCTGGTCCAC-CAGCCTGGCCA 213990 || ||||||||||||||||||| | ||||||| |||||||| || | | || || Sbjct 2458 CAGGTAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGGTCAACATAACGTG--CA 2515 Query 213991 CCAT-GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCT 214049 | ||| |||| ||||| | || ||||| ||||| || |||||||| || Sbjct 2516 GTGTCGTTAAAGACACGCAGCATTGGAACCAGTCCGTTCGAGGTACCGTTGGTGCCGCGG 2575 Query 214050 ATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTG 214109 || ||||||| | ||| | | ||| || || | || ||||| ||||| ||||| Sbjct 2576 ATGTACGAGCGCGCGGCACGGATCTTGTGCACCGACAAACCGATGCCTCCGGCCGACTTG 2635 Query 214110 GAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGG 214169 ||||| ||||| || ||| ||| || ||| || | || ||| || | | Sbjct 2636 CTGATCAATGCGCACTGCTTCAGAGTATCGTAGATTCCATCGATAGAGTCGTCCTTCATC 2695 Query 214170 TTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGG 214229 | || || |||||| ||| | ||||||| | | || ||| |||||||| |||||||| Sbjct 2696 TGCACCAGGAAGCATGACGACATCTGGGGCATTGGCGTGCCCGAGTTGAACAGCGTGGGC 2755 Query 214230 CTGGCATGGATCATAAACTTGTTA---GAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 ||||||| | | ||| | | || || ||| |||||| | | | | | | Sbjct 2756 GTGGCATG---CGTGAACAGGCGACGCGACAGCAGCTCGTAGGTGTGGATGGCGGCGTCA 2812 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCG-CAC-CTCATCAGCATGTGCTGGGGCCTCTC 214342 |||||| | ||||| || || || ||| | |||||||||||||||||| | ||| Sbjct 2813 ATGTCGCGGCCGTGGA--TGCCGATCGACACACGCATCAGCATGTGCTGGGGACGCTC 2868 >seq1043 Length=1979 Score = 156 bits (172), Expect = 8e-33 Identities = 387/578 (67%), Gaps = 16/578 (3%) Strand=Plus/Plus Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180 ||| |||| ||||||||||| | |||||| || ||||| || ||||| ||| |||| || Sbjct 206 ATACAGCAAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGA 265 Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 ||| | | || |||| | || | || |||||||| || || | |||| ||| Sbjct 266 GAACGACAAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGAGCAGAAACTGCC 325 Query 48241 AGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTT 48300 | |||||||| ||||| || || || || ||| | | ||| |||| | |||| Sbjct 326 ACTAAAGAAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATG-AGCGAG 384 Query 48301 CTTGTCTGAGATCCAG-GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 | || | ||||||| | ||| |||||||| || |||||||| | | || || |||| Sbjct 385 C--GTTGGTGATCCAGCGCAAG-GCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCT 441 Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCA 48416 | ||||| |||||||| | || || | | || | | ||||| |||| | Sbjct 442 CGATGGCGTGGAAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAA 501 Query 48417 GCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCC 48476 | | ||| |||||||||| | ||||| || ||||| ||||| || ||||| | Sbjct 502 GACT---GTAGGTCTCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAAC 558 Query 48477 TGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATC 48535 ||||| | |||||| || | ||| | | || |||||||| ||||| || Sbjct 559 GTGCCTCTGGGATCTGCACCTCAGACATGAAGC-GTGTGGCAAGATTCTCGTTGACAATG 617 Query 48536 CCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTG 48595 || || || || ||||||||||| || || || | | || || |||||||| | | | Sbjct 618 CCGTCCGATGCGGCAAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGTTC 677 Query 48596 AGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAG 48652 || || ||| | || | ||| | |||| || | ||||| | |||||||| Sbjct 678 AGCTTGTTCTCCCAATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAA 737 Query 48653 GACGCGAGTGCTTTTTTGTACATGCCCCATATGTCCGG 48690 || || ||| || ||||||||| ||| |||||||| Sbjct 738 GATGCCTCTGCCTTCTTGTACATGTTCCAAATGTCCGG 775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931204120295680