Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq13335 197 3e-45 seq1043 172 1e-37 seq3533 132 9e-26 seq19281 84.2 4e-11 >seq13335 Length=4250 Score = 197 bits (218), Expect = 3e-45 Identities = 667/1016 (66%), Gaps = 46/1016 (5%) Strand=Plus/Plus Query 221503 AAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGC 221562 ||||||||||||||| || || | || |||||||| || | ||| | | ||||||| | Sbjct 1801 AAAGACGTCGGCCAGACCTTGGATGCCAATACCGATTGGGCGGTGACGCATGTTGGAGGT 1860 Query 221563 GGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGAT 221622 | ||||| ||||| || || |||| |||||| | ||||||||||| | ||||| Sbjct 1861 GCGTGCTTCGGGCACAGGGTAGTAGTTACGGTCGATGATCTTGTTGAGGTTACGTGTGAT 1920 Query 221623 GACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCC----GTCG- 221677 || |||||| ||| | ||||| | | |||||| || || | Sbjct 1921 CGTCTTGGTCACCTCAAACAGGTGTTGGTGGT------CAAACTCGGCGGTTGTTGTTGC 1974 Query 221678 -----TGGAGGGGTTCC--ACAAAAGCGTTTAGGGCAA-CGCTGGCCAGGTTACACACGG 221729 |||| | | ||||| | || |||| || || | ||||| || || | Sbjct 1975 TCCATTGGACACCTGCTTGACAAACTTGGGCAGTGCAATCGATG-CAAGGTTGCAGACAG 2033 Query 221730 CCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGAT 221787 ||||||| || || | || ||||| |||||||| || || |||||||| || ||| Sbjct 2034 CCACCTCCTC--TGGCGACGTGTACTGGATGATCTCGGTGCACAGGTTGCTCGACGAGAT 2091 Query 221788 GGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGG 221847 || || |||| | || || ||||||| |||| | ||||||||| || || | || Sbjct 2092 AGTGCCGAGGTTCTGTTGGTTGGACTTGCCATTGCACGAGTCCTTGTATAGGATGTACGG 2151 Query 221848 ACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGT 221907 ||| ||||| | ||| | | | || ||| | ||| || ||| || | | || Sbjct 2152 GGTGCCTGTCTCGATCTGGGACTCGAGGATCGAGAACCACAGGTCTTGTGCCTTGATGGT 2211 Query 221908 CCT-CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCAC 221966 | | || | || ||| ||| || | ||||| || ||||| || | Sbjct 2212 GCGGCGTGCGAGG-CCGGGTGTCGCTTCGTAGCGCAGGTAGAGTTCGTTGAACTTCTCGC 2270 Query 221967 CGTACGCCTCGTCCAGGCCTGGACACCTGG--CGGGACACATCAGACTCCAGTGCTTGTT 222024 | | | ||| | |||||||| | ||| | |||| || | || ||||| ||| Sbjct 2271 CCCAGGTGTCGGCAAGGCCTGG-CGCCTCGTTCGGG-CAGAAGAGTGACCAGTCGGCGTT 2328 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 | | | || | |||||| || | ||| | |||||| || || | ||||| || | | Sbjct 2329 GGCCTCAACGCGCTGCATAAACAAGTCAGAGATCCAGAGTGCGTAGAAGAGGTCGCGAGC 2388 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 ||| ||||||| ||||| ||| || | ||| || | ||||| | ||||| ||||| Sbjct 2389 ACGCATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCCATGATGTCGGCGTG 2448 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCAT 222204 ||| |||||||| |||| ||| | ||||| |||||| ||||||||| || || || Sbjct 2449 CCATGGCTCCAGGTAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGGTCAAC-AT 2507 Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 | ||| | |||| |||| || || | || ||||||||||| || |||||||| Sbjct 2508 AACGTGCAGTGTCGTTAAAGACACGCAGCATTGGAACCAGTCCGTTCGAGGTACCGTTGG 2567 Query 222264 TGCCCTTAATGTACGCACCGC-CGGCCCTCAGGTTACTG-GCA--GACATGCCGATACCA 222319 |||| ||||||| | ||| |||| | || | || ||| |||| ||||| || Sbjct 2568 TGCCGCGGATGTACG-AGCGCGCGGCAC---GGATCTTGTGCACCGACAAACCGATGCCT 2623 Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379 ||||| || ||||| ||||| ||| ||||| || ||| || || |||||| Sbjct 2624 CCGGCCGACTTGCTGATCAATGCGCACTGCTTCAGAGTATCGTAGATTCCATCGATAGAG 2683 Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG--ATTTG-GTGGAACAGGCG 222436 || ||||| | | || ||| || || ||||||||||| | ||| | ||| | | | Sbjct 2684 TCGTCCTTCATCTGCACCAGGAAGCATGACGACATCTGGGGCATTGGCGTG---CCCGAG 2740 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492 || ||||||||||| |||| || || || || | |||| ||| ||||| || Sbjct 2741 TTGAACAGCGTGGGCGTGGCATGCGTGAACAGGCGACGCGACAGCAGCTCGTAGGT 2796 >seq1043 Length=1979 Score = 172 bits (190), Expect = 1e-37 Identities = 393/577 (68%), Gaps = 22/577 (4%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | |||||||||||||| | || |||||| ||||||||||| ||| Sbjct 772 GACATTTGGAACATGTACAAGAAGGCAGAGGCATCTTTCTGGACAGCCGAAGAGATCGAT 713 Query 25534 CTGGCCAAGGACATGGACGGCTG---GTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| | ||||| ||| || | || || | | |||||| || ||| || Sbjct 712 CTGGCAAGCGACATTCACGATTGGGAGAACAAGCTGAACGATAACGAGCGTCACTTTATC 653 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| |||| |||||||| || || || || || || ||||||||||| ||| | Sbjct 652 ACTCACGTACTGGCCTTCTTTGCCGCATCGGACGGCATTGTCAACGAGAATCT-TGCCAC 594 Query 25651 A-GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | | |||| || |||||| | ||||| |||||||| || ||||| || || Sbjct 593 ACGCTTCATGTCTGAGGTGCAGATCCCAGAGGCACGTTGTTTCTATGGATTCCAAATCGC 534 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGA 25766 |||||| || | ||||||||| || || ||||| || || ||||| | ||| Sbjct 533 CATCGAGAACATCCACTCTGAGACCTA---CAGTCTTCTCATCGACACCTACATCA-AGA 478 Query 25767 CGTCGCCGAGA--GAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 | |||||| ||| | ||| || ||||||||| || ||| | | |||| Sbjct 477 --ACACCGAGAAGAAGAACATGCTCTTCCACGCCATCGAGACTATCCCCGCCGTTAAGAA 420 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 ||| || |||||| || ||||||| || | | |||| | || | |||||| | Sbjct 419 GAAAGCCGACTGGGCCTTGCGCTGGATCACCAAC--GCTCGCT-CATTCGCCGAGCGTTT 363 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCT 25942 ||| |||||||| ||||| ||||| ||||| || || || || ||| | ||||| | Sbjct 362 GGTCGCCTTTGCCGCTGTCGAGGGTATCTTCTTTAGTGGCAGTTTCTGC-TCGATCTTTT 304 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||||||| || || |||| ||| ||| || || |||||||| ||||| | | Sbjct 303 GGCTCAAGAAGCGCGGTTTAATGCACGGCTTGTCGTTCTCGAACGAGCTGATCAGTCGTG 244 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 |||||||| | ||| | || |||||||| |||| || Sbjct 243 ACGAGGGTTTGCACTGCGACTTTGCCTGTTTGCTGTA 207 >seq3533 Length=1137 Score = 132 bits (146), Expect = 9e-26 Identities = 385/583 (66%), Gaps = 20/583 (3%) Strand=Plus/Plus Query 25467 ACACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGA 25526 ||| | ||| |||||||| ||||||||||| || || ||| |||||| || || || Sbjct 391 ACATACAGACATATGGGATATGTACAAGAAAGCAGAAGCTTCATTCTGGACAGCAGAGGA 450 Query 25527 GATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAGAC---GAGCAGC 25582 | || |||| || ||| ||| ||| | | | | | ||| ||| || | | Sbjct 451 ATTAGACTTGGCTTCTGATATGAACGATTGGGA-GAACAAGCTCAATGACAACGAACGAC 509 Query 25583 ATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATC 25642 | ||| ||| | ||| ||||||||||||| || || || ||||| || || ||||||| Sbjct 510 ACTTTATCACCAATGTGCTGGCATTCTTTGCCGCATCAGACGGTATCGTCAATGAGAATC 569 Query 25643 TGTGCGAGAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTC 25701 | | |||||| || || || ||| | ||||| || ||||| || || Sbjct 570 TCGCCACTCGATTCATGTCTGAGGTACAAATACCAG-AGGCCCGCTGCTTCTATGGCTTT 628 Query 25702 CAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTAC 25758 ||||| || || || || | ||| | ||| || || ||| |||| || ||| Sbjct 629 CAGATCGCGATTGAGAACATTCACGCAGAGACCTA---CAGTCTTTTGATCGACACATAC 685 Query 25759 ATTACAGACGTCGCCGAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCA 25816 ||| | || || | ||| | || || || || || ||| || ||| | Sbjct 686 GTTAAAA--GTAGCACAAAGAAACAGGAGCTTTTCAACGCGATAGAGACGATCCCCGCCG 743 Query 25817 TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCG 25876 | |||| |||||| |||||| || ||||||| || | | | | || | || Sbjct 744 TAAAGAAGAAGGCAGAGTGGGCGCTGCGCTGGATCACCAACTCTTG---TTCATTCGCCG 800 Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 | || |||| || |||||||| || ||||| ||||| |||||||| ||| |||| Sbjct 801 AACGTTTGGTGGCATTTGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTTTTGTGCCA 860 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 ||| |||| | ||| | | ||| ||||| || || ||||||||||||||| |||| Sbjct 861 TCTACTGGTTGAAGAAAAGGGGTTTAATGCCAGGCCTTACCTTTTCCAACGAGCTGATCA 920 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 | | ||||||||||| ||| | || ||||| ||| |||| || Sbjct 921 GTCGTGACGAGGGTCTACACTGCGACTTTGCTTGCATGCTGTA 963 >seq19281 Length=570 Score = 84.2 bits (92), Expect = 4e-11 Identities = 171/251 (68%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 222218 TTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTAC 222277 ||||| | || || | || || || ||||||||| ||||||||||| ||||| Sbjct 18 TTGAACACACGCAGCATGGGGACGAGACCGTTGGATGTGCCGTTGGTGCCACGGATGTAT 77 Query 222278 GCACCGCCGGCCC---TCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAG 222334 | || ||| | || || |||| |||| ||||| ||||| || || ||| Sbjct 78 GAACGCGAGGCACGGATCTTGTGGATGGC-GACA--CCGATGCCACCAGCAGACTTGGAG 134 Query 222335 ATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTC 222394 || | ||||| |||||||||||| ||||||||| || ||||||||||| | | Sbjct 135 ATGAGAGCGCACTGCTTGAGAGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATCTGG 194 Query 222395 AGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTG 222454 | || || || |||||||| |||| ||| | | ||||| ||||| || || || Sbjct 195 ACGAGGAAGCACGACGACATTTGAGGGATGGGAGTGCCAGCGTTGAACAGGGTTGGCGTG 254 Query 222455 GCGTGTGTAAA 222465 ||||| || || Sbjct 255 GCGTGAGTGAA 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928517068722880