Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq12 104 1e-17 >seq12 Length=339259 Score = 104 bits (114), Expect = 1e-17 Identities = 178/258 (69%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 78363 ATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGT 78422 ||||| || || |||| || || || || | || || || || ||||| |||||| Sbjct 191252 ATATGGTTATTATAAAGGTGGGCATCGCCAAGGGTATGGATAAAATCTCCCGACTCCAGT 191193 Query 78423 CCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATT 78482 ||||| | || |||| || || ||||| || || || ||||||||||| || | Sbjct 191192 CCGCAAACCTGTGCAACCATCATAGTCAGTAAGGCATAGGAGGCAATGTTAAAAGGTACC 191133 Query 78483 CCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGAT 78542 || | || | || | ||||| || || | || || || || ||||| ||| | | Sbjct 191132 CCCAGAAAAATATCTGCACTTCGCTGATAAAGCTGACAGCTCAGTTTTCCGTCA---GCT 191076 Query 78543 ACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGGA 78602 || ||||||||||| | | || || || || |||||||||| |||| || || | Sbjct 191075 ACATAAAACTGGAAAAAGGCATGGCAGGGTGGAAGTGCCATATGTTCTATCTCTGCCACA 191016 Query 78603 TTCCAAGCAGACACAATA 78620 ||||| |||||||||||| Sbjct 191015 TTCCAGGCAGACACAATA 190998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300056739988600