Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq192 98.7 2e-15 seq501 86.0 1e-11 >seq192 Length=15063 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 178679 CGGAAGGATGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCAATCCGAAAGGGTT 178738 |||||| |||||||| |||| ||||||| ||||||||||||| || | ||||||||||| Sbjct 5414 CGGAAGTGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGACCCGAAAGGGTT 5473 Query 178739 CTAGAGTTCAAATCTCTATCCTTCCACCAGAT 178770 | ||||||| ||||||| ||||| ||| || Sbjct 5474 CCAGAGTTCGAATCTCTGCGCTTCCGCCATAT 5505 >seq501 Length=12468 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 178306 CCCTTAGTTCAGTTGGATAGAACAACTGCCTTCTAAGCAGTAGGTCACTGGTTCGAGTCC 178365 ||||||| |||| |||||||| |||| ||||||||||| ||||||||| ||||||| ||| Sbjct 11107 CCCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCC 11048 Query 178366 AGTAGGG 178372 |||||| Sbjct 11047 TGTAGGG 11041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106057440273224