Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq4092 158 9e-34 seq501 82.4 5e-11 >seq4092 Length=20610 Score = 158 bits (174), Expect = 9e-34 Identities = 235/331 (71%), Gaps = 2/331 (1%) Strand=Plus/Minus Query 28544 GAGTATGGGGAGTTCGAAGGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTA 28603 |||| ||| | | | ||||| ||||| ||||||||||||| || ||| |||||| | Sbjct 16479 GAGTTTGGCGTGGTGGAAGGGGTAACCGACAAAGGTTACTACACCAACAGCTTCCACCTC 16420 Query 28604 GACGTACTGAAGAAGGTAAACCCGTATGATAAAATCGACTTTGAAGCGCAATTCATCCCA 28663 ||||| ||||||||| |||||||| ||||| ||||| || ||||||| | | || Sbjct 16419 GACGTGGAGAAGAAGGTCAACCCGTACGATAAGATCGATTTCGAAGCGCCGTACCCGCCG 16360 Query 28664 TACAGCTCCGGTGGTCATATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAA 28723 | ||| || || |||||||| || | ||| ||||| | || || | | Sbjct 16359 CTGGCCAACGGGGGGTTCATTTGCTACGGCGAGTACCCGAATATCCAGCATAACCTCAAG 16300 Query 28724 GCACTCGAAAATGTGTGGGATTACGCCTA-CACCAAAGTCCCATACTACGGCACCAACAC 28782 || || ||| | |||||||||||| ||| || | | || || |||||||| ||||| || Sbjct 16299 GCGCTGGAAGACGTGTGGGATTACAGCTATCAGC-ACGTGCCGTACTACGGGACCAATAC 16241 Query 28783 ACCAATTGATGAATGCTATAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGG 28842 || || ||||| ||||| ||||| || | || |||||| | || || ||||| || Sbjct 16240 GCCGATCGATGAGTGCTACGAGTGCGGTTTTACCGGCGAGTTCGAGTGCACCAGCAAGGG 16181 Query 28843 TTTTGAGTGTCCTAACTGCGGAAACCACGAC 28873 ||| || || || ||||| ||||||||| Sbjct 16180 CTTTACCTGCCCGAAATGCGGTAACCACGAC 16150 >seq501 Length=12468 Score = 82.4 bits (90), Expect = 5e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 45236 GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA 45295 ||||||||||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct 11110 GCGCCCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAA 11051 Query 45296 TCCTACAGGGCGTGCCAT 45313 |||| |||||||||||| Sbjct 11050 TCCTGTAGGGCGTGCCAT 11033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356571691218649