Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq2100 190 3e-43 seq345 120 5e-22 seq12 118 2e-21 seq85 104 4e-17 seq48 89.7 8e-13 seq7636 86.0 1e-11 seq3094 84.2 3e-11 >seq2100 Length=19628 Score = 190 bits (210), Expect = 3e-43 Identities = 229/309 (74%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 122360 ACCATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA 122419 ||||||||||| ||||| || || ||| | || | | || ||||||| ||| | Sbjct 19066 ACCATGAAACAGTATCTTGATTTGATGCAGAAAGTGC-TCACCGAGGGCACGCCAAAAAA 19124 Query 122420 -GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCA 122478 ||||| || ||||| ||||| | || | |||||| || ||||| ||| ||||||| Sbjct 19125 TGACCGCACCGGCACTGGCACGATCTCCATTTTCGGCCATCAGATGCGTTTTAACCTGCA 19184 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 |||| ||||||||||| || ||||| ||| | ||||||||||||||||| || Sbjct 19185 GGAAGGCTTCCCGCTGGTGACCACCAAGCGCTGTCATTTACGCTCCATCATCCATGAACT 19244 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 ||||||||||| |||||| ||||||||| |||||| | || |||||||||| || Sbjct 19245 GCTGTGGTTCCTGCAGGGCGACACCAACATCGCCTATCTGCACGAGAACAACGTCACCAT 19304 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||| || ||||| ||||| |||| | || || ||||| ||||| || || ||||| Sbjct 19305 CTGGGACGAGTGGGCGGATGAGAATGGCGACCTGGGGCCGGTCTACGGCAAACAGTGGCG 19364 Query 122659 TGAGTGGCC 122667 | ||||| Sbjct 19365 TTCCTGGCC 19373 Score = 140 bits (154), Expect = 5e-28 Identities = 112/135 (83%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 122789 ATCGACCAAATCAGCAAGGTCATGGAACAACTGAAAAACGACCCGGACAACCGCCGTATC 122848 |||||||| ||||||| ||| ||| | || |||||||||||||||||| |||||| ||| Sbjct 19393 ATCGACCAGATCAGCACGGTGATGAACCAGCTGAAAAACGACCCGGACTCCCGCCGGATC 19452 Query 122849 ATCGTCAGTGCCTGGAACGTGGCTGACCTGGATGAAATGGCGTTAGCACCATGCCATGCC 122908 |||||| || |||||||| | || |||||| |||||||| | || || ||||| ||| Sbjct 19453 ATCGTCTCGGCATGGAACGTCGGCGAGCTGGATAAAATGGCGCTGGCGCCGTGCCACGCC 19512 Query 122909 TTCTTCCAGTTCTAC 122923 ||||||||||||||| Sbjct 19513 TTCTTCCAGTTCTAC 19527 >seq345 Length=175672 Score = 120 bits (132), Expect = 5e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 |||||||| || || ||||| | || | |||||| || ||||| || || ||| Sbjct 150405 GACCGTACCGGGACAGGCACACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTGTCG 150464 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 ||||| || | |||||||| || | || ||| ||||||||||| ||||| Sbjct 150465 GCGGGTTTTCCTGCCCTGACGACCAAGAAACTGCATCTCAAATCCATCATCCACGAGCTG 150524 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 ||||||||||| | ||||| || |||||| ||||| || || ||| ||| | ||| Sbjct 150525 CTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGACGATC 150584 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||||||||||| || || | || ||||||| ||||| || || | || ||||| Sbjct 150585 TGGGATGAATGGGCCGACGAGAACGGCGATCTCGGGCCGGTCTATGGCTATCAGTGGCG 150643 >seq12 Length=339259 Score = 118 bits (130), Expect = 2e-21 Identities = 212/307 (69%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA-GA 122421 ||||||||||| | || ||| ||| ||| | ||| | ||| || ||||||| || Sbjct 190615 ATGAAACAATACTTAGATTTAATGCAGCTCGTGCTGGACCA-GGGAACACAAAAGCACGA 190673 Query 122422 CCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAA 122481 | | ||||| || |||||| | | || ||| || ||| | || |||| || | Sbjct 190674 CAGGACGGGAACAGGCACCATCAGTATTTTTGGCCATCAGATGAGGTTCAACCTCCAGGA 190733 Query 122482 AGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCT 122541 ||| || || |||||||| |||||||| |||| | ||||| ||||| || || | Sbjct 190734 AGGCTTTCCCCTGGTCACCACCAAAAAACTTCATTTAAAATCCATTATCCACGAACTGAT 190793 Query 122542 GTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 122601 ||||| | | || || ||||| || || ||||||| ||||| || | ||||| Sbjct 190794 CTGGTTTTTAAGTGGGGACACCAATATTGGCTACCTGAAAGCAAACAATGTAAAGATCTG 190853 Query 122602 GGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTGA 122661 |||||| ||||| |||||| | ||| | || ||||| || || || ||||||||| Sbjct 190854 GGATGAGTGGGCTGATGAAAACGGTGACCTGGGCCCTGTTTATGGATCACAATGGCGTTC 190913 Query 122662 GTGGCCA 122668 |||||| Sbjct 190914 ATGGCCA 190920 >seq85 Length=367292 Score = 104 bits (114), Expect = 4e-17 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 38224 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 38166 Query 169792 GTCAGTCCTGCCATTTT 169808 |||| || |||| ||| Sbjct 38165 GTCACTCGCGCCACTTT 38149 >seq48 Length=607718 Score = 89.7 bits (98), Expect = 8e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||| |||| |||| |||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 110292 GTAGTTCAGCTGGT-TAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTCCCG 110350 Query 169793 TCAGTCCTGCCATTTTTAA 169811 || | | || | |||||| Sbjct 110351 TCCGGTCCGCAAGTTTTAA 110369 Score = 86.0 bits (94), Expect = 1e-11 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||| |||| |||| |||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 108176 GTAGTTCAGCTGGT-TAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTCCCG 108234 Query 169793 TC 169794 || Sbjct 108235 TC 108236 >seq7636 Length=2863 Score = 86.0 bits (94), Expect = 1e-11 Identities = 198/296 (67%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA-G 122420 |||||| |||||||| || ||||| || || |||||| | ||| || ||| | Sbjct 2308 CATGAAGCAATATCTCGAACTACTGAACGATGT-CGTGACCAATGGCCTGACCAAGGGCG 2250 Query 122421 ACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAA 122480 |||| || ||||| |||||| | | | || | | || | || | | || Sbjct 2249 ACCGCACCGGCACCGGCACCAAGGCCGTGTTTGCCCGTCAGTTTCGGCATAGCTTGGCCG 2190 Query 122481 AAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTC 122540 | || ||||||||| | || ||||| ||| ||||| || |||| | |||| | Sbjct 2189 ACGGCTTCCCGCTGCTGACCACCAAGAAGCTTCACTTCAAAAGCATCGCCAATGAATTGA 2130 Query 122541 TGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCT 122600 | ||| | | | ||| | ||||||||| ||| ||||| || || ||| |||||| Sbjct 2129 TCTGGATGTTGAGTGGCAACACCAACATCAAGTGGCTGAACGAAAATGGCGTGCGTATCT 2070 Query 122601 GGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGG 122656 |||| |||||||| ||||| || | || |||||||||||||| |||| ||| Sbjct 2069 GGGACGAATGGGCCACCGAAGACGGCGACCTGGGCCCGGTGTACGGCGAGCAGTGG 2014 >seq3094 Length=9505 Score = 84.2 bits (92), Expect = 3e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 123194 GTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGCAG 123253 || ||||| || || ||| || |||||| |||||| || |||||| | | ||||| Sbjct 9505 GTCTGGACCGGCGGCGATACCCACCTGTACAGCAACCATCTTGAGCAGACCAACCTGCAG 9446 Query 123254 TTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCTATC 123313 ||| |||||||| | |||| | || | ||| || ||||| |||| || || Sbjct 9445 CTAAGCCGCGAACCGCGTCCGCTGCCGAAGCTGGTCATCAAACGCAAGCCGGCGTCGATT 9386 Query 123314 TTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATTAAG 123373 |||||||| |||||||| ||||| | | || ||||| ||||| | ||||| Sbjct 9385 TTCGACTACCGCTTTGAAGACTTCGAGATTGAAGGTTACGATCCGCATCCGGGCATTAAA 9326 Query 123374 GCACCGGTGGCGAT 123387 || ||||||||||| Sbjct 9325 GCGCCGGTGGCGAT 9312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777357622269200