Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_020083.1 Length=157834 Score E Sequences producing significant alignments: (Bits) Value seq3869 156 4e-33 seq501 105 7e-18 >seq3869 Length=8584 Score = 156 bits (172), Expect = 4e-33 Identities = 290/421 (69%), Gaps = 6/421 (1%) Strand=Plus/Minus Query 106041 CACCGGTAAATTCAGTCTGCCGACCCCGATCATGGCTGGCGTCCGTACCCGTACCCGTCA 106100 |||| |||| || |||||||| ||||||||| | ||||| ||||||| |||||||| Sbjct 4779 CACCTTTAAAATCTCGCTGCCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCA 4720 Query 106101 GTTCAGCTCCTGTGTGCTGATCAAAGTCGGCGACACGCTGGACTCTATCAAGGCCGCAGG 106160 |||||||||||| ||||||||| | |||||||| ||||| || ||||| ||| | Sbjct 4719 GTTCAGCTCCTGCGTGCTGATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCCACCTC 4660 Query 106161 CTCTGCTATCGTTGACTATGTCAGCAAGCGCGCAGGCATCGGTCTGGACGTGGGGGAGAT 106220 | || || || | || || | ||||||| |||||||| | ||| ||| || Sbjct 4659 CAGCGCGATTGTGAAATACGTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCAT 4600 Query 106221 TCGTGCCCTCGGTGCTCCTATCCGTGGCGGTGAGATGGAGCATACCGGAACTATCCCATT 106280 ||| || || || || ||||| ||||| || || ||||| || || || Sbjct 4599 TCGCGCGCTGGGCAGCCCGATCCGCGGCGGCGAAGCCTTCCACACCGGCTGCATTCCGTT 4540 Query 106281 CATCAAGAAGTTC--GTCGGTGACCTGAAGAGCTGCTCTCAGGGTGGGGTTCGCGGCGGC 106338 | |||| | ||| | | | | |||| |||||| ||||| || || ||||||||| Sbjct 4539 CTACAAGCATTTCCAGACCGCG--GTGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGC 4482 Query 106339 TCTATGACTGCCTACTATCCGATGTGGCACCT-GCAGTTCCCAGCCATGATTGTTCTGAA 106397 | || || ||| || |||||||| || | ||| |||| || | || ||||| Sbjct 4481 GCGGCAACCCTCTTCTACCCAATGTGGCATCTGGAAGTGGAAAGCC-TGCTGGTGCTGAA 4423 Query 106398 GAATAACCGTGGCACTGAGAACAACCGCGAACGCCGCACTGATTATGGTGTGCAGATCAA 106457 || |||||||| || || |||||||| || | || || || || || |||||||| Sbjct 4422 AAACAACCGTGGTACCGACGCCAACCGCGTTCGTCACATGGACTACGGGGTACAGATCAA 4363 Query 106458 C 106458 | Sbjct 4362 C 4362 >seq501 Length=12468 Score = 105 bits (116), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19326 ATTTGGTAGTCCCTGTTGGCTTTGAACCAACGACCAAGCGATTATGAGTCGCATGCTCTA 19385 ||||||| | ||||| ||| |||||||| |||||||||||||||||||||| ||||||| Sbjct 4859 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 4800 Query 19386 ACCACTGAGCTAAGGG 19401 |||||||||||||||| Sbjct 4799 ACCACTGAGCTAAGGG 4784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504762637950480