Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq3869 172 5e-38 >seq3869 Length=8584 Score = 172 bits (190), Expect = 5e-38 Identities = 200/270 (74%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 76460 GAACGCCCAAGTCTCTACCCATGTTTCCAGGGTGGTGTCGGATACGATCGGCAGAAGAAC 76519 ||| ||||| || |||||||| || ||||| | | ||| | | |||||| | | Sbjct 2653 GAAGGCCCAGGTTTCTACCCAGGTCTCCAGCTCCGGGATGGAGATCAGCGGCAGCAACGC 2712 Query 76520 TGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTTGCTGAT 76579 | ||||| | ||||||||| | || || || || |||||||||||||||||||||| Sbjct 2713 CACATTCGGGCTACGGCCCTGGATGGAGTCGAGCAGCGTCTGGTACTTCAGGTTGCTGAT 2772 Query 76580 GAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATTCGGTCACGGGTCACGTT 76639 ||| || || || || || |||||||| | ||||||||| || || |||| |||| Sbjct 2773 GAAAATATGTTTTTCATGTTCCGGCAGCGCCTGGTAGTCGATGCGATCGCGGGAAACGTC 2832 Query 76640 AACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAACTTCGC 76699 ||| ||||| || ||||||||||| | || ||||||||||||||||| || || | | Sbjct 2833 AACCTCTTCCGGGCGCCAGAAGAAGGAGAGCTGCTTTTCAATCAGCTTTTCAAAGATGTC 2892 Query 76700 ATGTTTCTGCTGGTCGTAGCGAGAAACGTT 76729 | ||| ||||| |||||||| | ||||| Sbjct 2893 GTATTTTTGCTGATCGTAGCGGGCCACGTT 2922 Score = 145 bits (160), Expect = 7e-30 Identities = 326/483 (67%), Gaps = 15/483 (3%) Strand=Plus/Plus Query 74813 TTCCTGTGGTGTTACCTGCACATTACTGGTGCTCAGGTGGCTGTTGATCCAAGGGATCGG 74872 |||||| || | ||||| || || || | ||| | |||||||||| |||||||| Sbjct 1942 TTCCTGCGGCGCCACCTGAACGTTGTCGGAGACCAGCCAGGTGTTGATCCATGGGATCGG 2001 Query 74873 GTTCTTGCCGGGCTTATCTGTCAACGCAC--CCAGACCAACTGCCCGCATACGCTGGTCA 74930 ||| || || |||| | ||| | || || || ||| |||| || | Sbjct 2002 GTTGGAGCGGG-----TCTGGAACGGCAGATCGAGGCCCACCGCCTGCATGCGGATATTG 2056 Query 74931 GTGATATAGTCGATGTATCCGTCCAGCATACCTTTGTTCAGTCCAATCATCGACCCGTCT 74990 ||||| || |||| ||| | || ||| |||| ||||| || |||||||| ||||| Sbjct 2057 GTGATGTACTCGACGTACTGGCAGAGAATATCTTTATTCAGGCCGATCATCGAGCCGTCG 2116 Query 74991 TTGAACAGGAAGCTGCCCCAGTCTTTCTCCTGCACCGATGCGTCGATAAATCCCTGTCGT 75050 ||||||| || |||| |||||||||||| || || | || | ||| | Sbjct 2117 CGGAACAGGTAGTCCGCCCACTCTTTCTCCTGCTGCGCCGCCAGCACGAA--CAGGTCAT 2174 Query 75051 -GCT-TCCTCGTGGCAATCTTCTGCCACACGGGCAAA--CAGGTCACCTTCGTTACCGTT 75106 || |||| | ||| ||||| || | || | | || | | ||| | ||| Sbjct 2175 AGCACTCCTGCTTGCACTCTTCGGCGATTTCCGCCATTTCCGG--ATCGTCGCTGCCGGA 2232 Query 75107 CTGCATTTCTTTCAGCATATACTGGGTGCCGGACAAATGCAAGGCTTCATCACGAGCAAT 75166 ||| |||||||||| ||||||||||| || |||| |||||||| || || || Sbjct 2233 GCGCAGCAGGTTCAGCATATGCTGGGTGCCGGTCAGGTGCAGCGCTTCATCGCGGGCGAT 2292 Query 75167 CAGTTCGATAATGTTGGTGTTGCCCAGCATTACCCCGCGCTCACCGAAGGCGAAGGAGCA 75226 ||| |||||| |||| |||||| ||| | ||| || | |||||||||||||| Sbjct 2293 CAGGCGGATAATTTTGGCGTTGCCTTCCATCAGTTTGCGTTCGGCAAAGGCGAAGGAGCA 2352 Query 75227 GGCAAAGCTCACGTAGAAGCGGATCGCTTCCAGTGCGTTGATGTTGTGAAGGCACAGGTA 75286 ||| ||||| ||||||||||||||||||||||| || || | | | |||||||| || Sbjct 2353 GGCGAAGCTGACGTAGAAGCGGATCGCTTCCAGGGCATTAACGCTCATCAGGCACAGATA 2412 Query 75287 CAG 75289 || Sbjct 2413 GAG 2415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455228121754280