Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13335 158 1e-33 seq19281 120 4e-22 seq2691 104 3e-17 seq6392 102 1e-16 seq4933 98.7 1e-15 seq271 93.3 5e-14 seq3533 89.7 6e-13 >seq13335 Length=4250 Score = 158 bits (174), Expect = 1e-33 Identities = 464/714 (65%), Gaps = 27/714 (4%) Strand=Plus/Minus Query 75125 AAGCGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAA 75184 ||||| |||| ||||| || | ||||| |||| || || ||||||||||| || || Sbjct 2949 AAGCGCGACTTTGATTATGACTTTTTTGGCTTCAAGACACTCGAGAAGAGCTACCTGCAG 2890 Query 75185 CGGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGC 75244 || |||| | | | || || ||| ||||| | ||||| || | |||||| Sbjct 2889 CGCATCGACAACGAGATTGTCGAGCGTCCCCAGCACATGCTGATGCGTGTGTCGATCGGC 2830 Query 75245 ATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG 75304 |||||||| |||||||| | | | | | || ||||| | |||| | | || Sbjct 2829 ATCCACGGCCGCGACATTGACGCCGCCATCCACACCTACGAGCTGCTGTCGCGTCGCCTG 2770 Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| || || || || || || ||||| | || || |||| || |||||||| Sbjct 2769 TTCACGCATGCCACGCCCACGCTGTTCAACTCGGGCACGCCAATGCCCCAGATGTCGTCA 2710 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 |||||||| | | ||||| ||||| ||| | || ||||| | ||||| | | || Sbjct 2709 TGCTTCCTGGTGCAGATGAAGGACGACTCTATCGATGGAATCTACGATACTCTGAAGCAG 2650 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG------GATGCACA---TCCATGAT 75475 || || ||| |||| ||| || || || || | |||||| ||| || Sbjct 2649 TGCGCATTGATCAGCAAGTCGGCCGGAGGCATCGGTTTGTCGGTGCACAAGATCCGTGCC 2590 Query 75476 GTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAATCAGATGGTATTATTC 75533 | | | |||||| | || || || || ||| || | || | ||| Sbjct 2589 GCGCG-----------CTCGTACATCCGCGGCACCAACGGTACCTCGAACGGACTGGTTC 2541 Query 75534 CAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC----GC 75589 ||||||| || || ||||||| ||| || || ||||| | || | | |||| | || Sbjct 2540 CAATGCTGCGTGTCTTTAACGACACTGCACGTTATGTTGACCAGG-GTGGCGGCAAGCGC 2482 Query 75590 AAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAG 75649 ||||| || | || ||||| |||| |||||||| ||||| ||||||||||||||||| Sbjct 2481 AAGGGCGCCTTTGCCATCTACCTGGAGCCATGGCACGCCGACATCATGGAGTTCCTTGAC 2422 Query 75650 TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGG 75709 | || ||||| || | || ||| || | | || ||||| | | || ||| Sbjct 2421 CTGCGCAAGAACCACGGCAAGGAGGAGATGCGTGCTCGCGACCTCTTCTACGCACTCTGG 2362 Query 75710 ATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCA 75769 || | ||| | || ||| |||| ||||||| | | ||||| || ||||| || Sbjct 2361 ATCTCTGACTTGTTTATGCAGCGCGTTGAGGCCAACGCCGACTGGTCACTCTTCTGCCCG 2302 Query 75770 GACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTAC 75823 || |||| ||||| || ||||| | ||| ||| |||| | | |||||| Sbjct 2301 AACGAGGCGCCAGGCCTTGCCGACACCTGGGGCGAGAAGTTCAACGAACTCTAC 2248 Score = 91.5 bits (100), Expect = 2e-13 Identities = 312/480 (65%), Gaps = 20/480 (4%) Strand=Plus/Minus Query 76463 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCA 76522 || ||| | |||||| |||| ||||| || |||||| | ||||| || |||||||| Sbjct 1587 CTGAAGAAGCGCATCGTCGAGACTGGTCTGCGCAACAGTTTGTTGATTGCTCCAATGCCC 1528 Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT-GAACCATACACAACAAA 76581 || || || ||| | |||||| | || || || ||| ||||| || |||||||| | || Sbjct 1527 ACCGCATCGACCTCCCAAATCCTCGGCAACAACGAA-GCTTTCGAGCCATACACCAGCAA 1469 Query 76582 CATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAA 76641 ||| ||| | | || || |||||||| | | ||||||||||| || | | Sbjct 1468 CATTTACAGTCGTCGTGTGCTTGCCGGTGAGTTCACCGTCGTCAACAAGCAGCTGCTGCA 1409 Query 76642 TGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG---GATCTCATGGTGAAAGC 76698 ||| | | | | ||||| ||| | || |||||| || |||| | || Sbjct 1408 GGACTTGATGGCACTCGGTCTGTGGACACCCGAGATGAAGAACGAGATCATTGCCAA--- 1352 Query 76699 GGGTGGTTCCATTCAAAATATCTCAGAT---ATCCCAGATGATATCAAGAATCTCTACCG 76755 ||||||| || || ||| ||| ||||| || || | || | || ||| Sbjct 1351 CCGTGGTTCGATCCAGGCGATC---GATTCCATCCCCGAAGACCTGAAAGAGCTGTACAA 1295 Query 76756 CACAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCG 76812 || |||||||| ||| || | | | || || ||||| || || |||||| Sbjct 1294 GACCGTGTGGGAGATCCGTCAGCGCACA---CTGATCGATATGGCGGCCGACCGTGGTGC 1238 Query 76813 CTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCT 76872 ||||| || |||||||| || | || | || || | |||| | ||||||| Sbjct 1237 TTTCATCGACCAAAGTCAGAGCTTCAACGTGTTTATCGCCGAGCCAAGCTTTGCCAAGCT 1178 Query 76873 CTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | | || ||||| | || || ||||| |||| || || || || |||||||| || || Sbjct 1177 CACCTCGATGCACTTTTATGCCTGGAAGAAGGGACTGAAGACTGGCATGTACTACCTGCG 1118 >seq19281 Length=570 Score = 120 bits (132), Expect = 4e-22 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| | ||||| ||| | || ||||||||||| ||||||||| | | | | | | Sbjct 351 ACATGCTGATGCGTGTCTCGATTGGCATCCACGGCACCGACATTGATGCCGCCATCCACA 292 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| || | | || || || |||||| |||||| || |||||||| ||||| |||| Sbjct 291 CCTACAACCTGCTCTCGCAGCGTCTGTTCACTCACGCCACGCCAACCCTGTTCAACGCTG 232 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | || || | || || ||||| |||||||| || | ||||||||||| ||| Sbjct 231 GCACTCCCATCCCTCAAATGTCGTCGTGCTTCCTCGTCCAGATGAAGGAGGACTCGATCG 172 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 | || ||||| | ||||| | | |||| || | ||||| |||| ||||| || || | Sbjct 171 AGGGCATCTACGACACTCTCAAGCAGTGCGCTCTCATCTCCAAGTCTGCTGGTGGCATCG 112 Query 75459 G 75459 | Sbjct 111 G 111 >seq2691 Length=892 Score = 104 bits (114), Expect = 3e-17 Identities = 303/459 (66%), Gaps = 11/459 (2%) Strand=Plus/Plus Query 175228 GAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATC 175287 || ||| |||| | || |||||| | ||| ||| || | | ||| ||||||||| Sbjct 135 GAGGAGTTTGTCAACTTCCTCAAGGATCCCAAGAAGTACCACGACATTGGCGCCAAGATC 194 Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347 || || || ||| | || || || || || |||||||| | |||||| || Sbjct 195 CCACGCGGTGCCATCCTGATCGGACCACCTGGAACCGGAAAGACGTTGCTCGCCAAGGCA 254 Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATG 175407 | || || ||| | || || |||||| | | ||||| | ||||||| |||||| Sbjct 255 ACTGCTGGCGAAGCCAACGTGCCATTCTACTCGACCTCTGGTTCGGACTTTGTCGAGATG 314 Query 175408 TTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAA 175467 ||||| ||||| || | | | |||||||| |||||||| || ||| | | | Sbjct 315 TTTGTCGGTGTCGGACCGGCACGTGTTCGCGACCTCTTTGAGCAGGCACGCAAGAGTGCT 374 Query 175468 CCATGTATTGTCTTCATTGATGAGATTGATGCGGT-GGGCAAGCAACGCAGCGCTGGTGG 175526 ||||| ||||| |||||||| ||||| || || | || | || ||| || ||||| Sbjct 375 CCATGCATTGTGTTCATTGACGAGATCGACGCCATCGGTCGTGC-ACGTGGCAAGGGTGG 433 Query 175527 --TATGC-CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGA 175583 | || | |||| |||||| | || | || | || ||||| || |||||||| Sbjct 434 ATTCAGCGGATCAAACGACGAGCGTGAGAACACTCTGAACCAACTTCTAGTAGAGATGGA 493 Query 175584 TGGCTTT-GACAA--TGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATAT 175640 |||||| || | ||| || ||||||| |||| ||||| ||||| ||||| Sbjct 494 CGGCTTTACACCACTCAAGAATG---TTGTGGTGTTTGCTGCCACCAATCGTCCAGATAT 550 Query 175641 CCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 ||| || | || | | || || || ||||| || || Sbjct 551 CCTCGACCAGGCGTTGTTGCGTCCTGGCCGTTTCGACCG 589 >seq6392 Length=4631 Score = 102 bits (112), Expect = 1e-16 Identities = 295/454 (65%), Gaps = 17/454 (4%) Strand=Plus/Minus Query 76484 AAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATC 76543 || ||||| |||||| ||| |||| ||||| ||||| || || |||||| |||||||| Sbjct 4450 AACGGTCTGCGTAACTCTCTGCTGATCGCACCTATGCCCACCGCATCCACCTCACAAATC 4391 Query 76544 TTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTC 76603 | || || ||||| ||| ||||||||||| | ||||||||| | | | Sbjct 4390 CTCGGCAACAATGAGGCCTTCGAACCATACACCAGCAACATCTACAGTCGCCGTGTTTTG 4331 Query 76604 GCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTC 76663 || || ||||| | ||||||||||||| | | | ||||||| | | | |||||| Sbjct 4330 GCCGGCGAGTTCACCGTTGTCAACAAGCAGTTGCTGCAAGACCTCATGGATCTCGGTCTC 4271 Query 76664 TGG------TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAAT 76717 ||| |||| | || ||||||| | || || Sbjct 4270 TGGANNNNNNNNNNNNNNNNNNNNNNNATCATTGCCAA---CCGTGGTTCGGTCCAGAAA 4214 Query 76718 ATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAG 76774 ||| | | || || || || | | |||||| || || ||||| || | || Sbjct 4213 ATCACCAACATTCCCGAGGAATTGCGTGACCTCTACAAGACTGTCTGGGAGATTCGCCAG 4154 Query 76775 ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT 76834 | | || || |||||||| || || |||||| ||||||||| || ||||| ||| Sbjct 4153 -CGTGTGCTG--ATCGACATGGCAGCCGACCGTGGTGCCTTCATTGACCAGAGTCAGAGT 4097 Query 76835 ATGAATCTATTCAT-GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGC 76893 | || | || || | || ||||| || |||||||| |||| |||||| | || || Sbjct 4096 TTCAACGTCTTTATCGCCGAGCCCAACTTTG-CCAAGCTCACTTCAATGCATTTCTATGC 4038 Query 76894 GTGGAAACAGGGGCTCAAAACCGGAATGTACTAT 76927 ||||| |||| || || ||||| ||||||||| Sbjct 4037 ATGGAAGAAGGGTCTGAAGACCGGCATGTACTAT 4004 >seq4933 Length=3897 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||| | ||| ||| | | | |||| ||||||| ||||| ||||||||| Sbjct 190 GGTGCCAAGCTACCCAAAGGTATCTTGATGTCGGGCGAGCCAGGAACGGGTAAGACCCTC 249 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 ||||| || |||||||| ||||| | || || ||| || | | ||| | | | | Sbjct 250 CTCGCACGTGCCATCGCAGGTGAGGCGGGCGTTCCCTTCCTCTACACCACTGGCTCTAGC 309 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 || | |||| | |||||||| ||||| || | || ||||| | ||||| ||||| Sbjct 310 TTCGACGAGAAATACGTTGGTGTCGGTGCAAAGCGTGTGCGCGAGTTGTTTGATCTCGCC 369 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG 175509 | || | ||||| || | ||||| ||||||||||| |||| || ||| Sbjct 370 AGGTCCAAGGAGCCATGCATCATTTTCATCGATGAGATTGACTCGGTAGGAAAG 423 >seq271 Length=183270 Score = 93.3 bits (102), Expect = 5e-14 Identities = 265/403 (66%), Gaps = 16/403 (4%) Strand=Plus/Minus Query 175285 ATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGA 175344 || || || |||| || |||| ||| || ||||| || ||||| || || || || Sbjct 18359 ATTCCGCGCGGCGTGCTGCTCGTCGGTCCTCCCGGTACCGGTAAGACGCTTCTGGCGCGC 18300 Query 175345 GCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAG 175404 |||||||| |||||| | ||||| || ||| || ||| | | |||| || || Sbjct 18299 GCCATCGCCGGTGAAGCCAATGTGCCGTTCTTCACCATCTCCGGTTCCGACTTCGTTGAA 18240 Query 175405 ATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAA--- 175461 ||||| || ||||| ||||| | || || || | || ||| | ||||| Sbjct 18239 ATGTTCGTCGGTGTCGGTGCATCGCGTGTGCGTGACATGTTCGAA----CAGGCGAAGAA 18184 Query 175462 -AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGC 175520 ||| ||| || || ||||||| || || || |||||||| ||| || ||| |||| Sbjct 18183 GAATGCACCCTGCATCATCTTCATCGACGAAATCGATGCGGTCGGCCGTCATCGCGGCGC 18124 Query 175521 TGGTG-GTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGA 175579 ||| | | | |||| |||||| | ||||| || | || || || || ||||| Sbjct 18123 CGGTCTGGGCGGCGGCAA-TGACGAACGCGAACAGACGCTGAACCAGCTGCTGGTCGAGA 18065 Query 175580 TGGATGGCTTTGA---CAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGG 175636 ||||||| || || |||||| ||| | | | || || || || || || | Sbjct 18064 TGGATGGTTTCGAGGCCAATGA---AGGCGTCATCCTGATCGCTGCGACCAACCGTCCCG 18008 Query 175637 ATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || | || ||| ||| | || || ||||| |||||||| || Sbjct 18007 ATGTTCTCGATCCGGCCTTGCTGCGTCCGGGCCGTTTTGACCG 17965 >seq3533 Length=1137 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/208 (70%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGC 65080 |||||||||| | ||||| || ||| | ||| || ||| | || |||||||| | Sbjct 747 AGAAGAAGGCAGAGTGGGCGCTGCGCTGGAT---CACCAACTCTTGTTCATTCGCCGAAC 803 Query 65081 GCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTT 65140 | | | || ||||| || ||||||||||||||| ||| || || || || | Sbjct 804 GTTTGGTGGCATTTGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTTTTGTGCCATCT 863 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 | ||||||||||| ||||| | ||||||||||| ||| || || || || || | Sbjct 864 ACTGGTTGAAGAAAAGGGGTTTAATGCCAGGCCTTACCTTTTCCAACGAGCTGATCAGTC 923 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | || |||||||| ||| || ||||| Sbjct 924 GTGACGAGGGTCTACACTGCGACTTTGC 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596359107873760