Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq3869 367 9e-97 seq4092 107 1e-18 >seq3869 Length=8584 Score = 367 bits (406), Expect = 9e-97 Identities = 722/1058 (68%), Gaps = 45/1058 (4%) Strand=Plus/Minus Query 10934 CAAACAAAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCC 10993 || || |||||||| || ||| ||| || ||||| || ||||| | |||||||| || Sbjct 2973 CAGACGAAAAACGATCAGCTGCTGGAACCTATGTTTTTTGGCCAGCCGGTTAACGTGGCC 2914 Query 10994 CGTTACGACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTC 11053 || ||||| || || ||| | || | ||||| || || | | | ||||| || || ||| Sbjct 2913 CGCTACGATCAGCAAAAATACGACATCTTTGAAAAGCTGATTGAAAAGCAGCTCTCCTTC 2854 Query 11054 TTCTGGCGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACTACAGTAAAATGACT 11113 |||||||| || ||||| ||||| || || | || || ||||||||| || | Sbjct 2853 TTCTGGCGCCCGGAAGAGGTTGACGTTTCCCGCGATCGCATCGACTACCAGGCGCTGCCG 2794 Query 11114 GATGCGGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACATTACTCGACTCGATC 11173 || || ||||| || ||||| || |||||||||||||| || | |||||||| ||| Sbjct 2793 GAACATGAAAAACATATTTTCATCAGCAACCTGAAGTACCAGACGCTGCTCGACTCCATC 2734 Query 11174 CAAGGCCGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACT 11233 || ||||||||||||||| ||||||| ||||| | | || | || || | || || Sbjct 2733 CAGGGCCGTAGCCCGAATGTGGCGTTGCTGCCGCTGATCTCCATCCCGGAGCTGGAGACC 2674 Query 11234 TGGGTAGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCATACACACACATCATT 11293 ||||||||||| ||| |||| ||| ||||| ||||| ||||| ||||| |||||||| Sbjct 2673 TGGGTAGAAACCTGGGCCTTCTCCGAGACCATTCACTCGCGTTCGTACACTCACATCATC 2614 Query 11294 CGCAATATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATC 11353 ||||| || ||||| ||||| | |||||||| || | || || |||| ||| Sbjct 2613 CGCAACATCGTCAACGACCCGGCGACCGTGTTCGACGACATCGTCACCAACGAGCAGATC 2554 Query 11354 CTAGAGCGAGCTAAAGATATTGCTCGTTACTACGA-----CGATC-------TCATCT-- 11399 | | || || ||| || ||| || ||||| |||| || || Sbjct 2553 CAGAAACGTGCGGAAGGCATCTCTCACTATTACGATTCGCTGATCGAAATGACCAGCTAC 2494 Query 11400 TGGCAT-------GCAAAG--AGCATGAGC-TAAACGGCAAACAC---AC----AA--TG 11440 |||||| || ||| | | | | | ||||||||| | || || || Sbjct 2493 TGGCATCTGCTGGGCGAAGGCACCCACACCGTCAACGGCAAAACCGTGACCGTGAATCTG 2434 Query 11441 CGCGACCTAAAGAAAAAGTTGTACTTGTGCATGATGGCTGTTAATGTATTAGAAGCAGTT 11500 ||||| || || || || | || ||||| ||||| ||||||| | ||||| | Sbjct 2433 CGCGAGCTGAAAAAGAAACTCTATCTGTGCCTGATGAGCGTTAATGCCCTGGAAGCGATC 2374 Query 11501 CGTTTCTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCGAGATTATGGAAGGT 11560 || |||||||| || ||||| || || || || || || |||||| | | |||||||| Sbjct 2373 CGCTTCTACGTCAGCTTCGCCTGCTCCTTCGCCTTTGCCGAACGCAAACTGATGGAAGGC 2314 Query 11561 AATGCTAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACCAAAGCGGTACACAG 11620 || || ||||| ||| || || || || |||||||| || |||| | ||| || ||| Sbjct 2313 AACGCCAAAATTATCCGCCTGATCGCCCGCGATGAAGCGCTGCACCTGACCGGCACCCAG 2254 Query 11621 CACATGCTGAAGATGTGGAACAACGGCACCGATGATATGGAAATGGCTTCTATCGCACAT 11680 || |||||||| || | | ||||| ||| ||| ||||||||| ||||| | Sbjct 2253 CATATGCTGAACCTGCTGCGCTCCGGCAGCGACGATCCGGAAATGGCGGAAATCGCCGAA 2194 Query 11681 GAGTGTCGCGAAGAGT-CAATCGAAATATTCAAGATGGCCGAAGAACAAGAGAAAGACTG 11739 ||||| | |||| | || || | ||| | |||| | | || |||||||| || Sbjct 2193 GAGTGCAAGCAGGAGTGCTAT-GACCTGTTCGTGCTGGCGGCGCAGCAGGAGAAAGAGTG 2135 Query 11740 GGCAAACTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAGATATTCTATGTGA 11799 ||| |||| || ||| || || |||||||| || || ||||||||||| || | Sbjct 2134 GGCGGACTACCTGTTCCGCGACGGCTCGATGATCGGCCTGAATAAAGATATTCTCTGCCA 2075 Query 11800 ATATGTTGAGTACATCACAAGCCACCGAATGAAGTATGTCGGGCT--ACCT-CCG--CTA 11854 || || ||||||||||| | ||| ||| || || || || | || ||| | | Sbjct 2074 GTACGTCGAGTACATCACCAATATCCGCATGCAGGCGGTGGGCCTCGATCTGCCGTTCCA 2015 Query 11855 CACCCGGAAGCAACTAACCCAATCCCATGGATCAACAACTGGTTGGTTAGTGATAATGTT 11914 ||||| | ||||| |||||||||||||||| |||| |||| || || ||| Sbjct 2014 GACCCG-----CTCCAACCCGATCCCATGGATCAACACCTGGCTGGTCTCCGACAACGTT 1960 Query 11915 CAAGTTGCTCCACAGGAAGCCGAGATTAGTTCATACCT 11952 || || || || ||||||| || | ||||| || || Sbjct 1959 CAGGTGGCGCCGCAGGAAGTGGAAGTCAGTTCTTATCT 1922 Score = 363 bits (402), Expect = 1e-95 Identities = 1073/1640 (65%), Gaps = 22/1640 (1%) Strand=Plus/Minus Query 9218 TTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCCGACACCAATCATGTCTGGTGTT 9277 ||||| || || | | ||| ||| ||||||| || ||||| || |||||||| || || Sbjct 4796 TTCTACGACGCGGTGTCCACCTTTAAAATCTCGCTGCCGACGCCGATCATGTCCGGCGTG 4737 Query 9278 CGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCGAAAGCGGTGATAGCCTAAAA 9337 ||||| || ||||| || |||||||| ||||| ||||| |||| || ||||| | Sbjct 4736 CGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGCTGATCGAGTGCGGCGACAGCCTGGAT 4677 Query 9338 TCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTTCACAGCGTGCAGGTATTGGC 9397 || ||||| || || || |||| || |||| |||||||| ||||| || || || ||| Sbjct 4676 TCCATCAACGCCACCTCCAGCGCGATTGTGAAATACGTTTCCCAGCGCGCCGGCATCGGC 4617 Query 9398 ATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACAT 9457 || ||||| || || || || || | || ||| || || || ||||| | || Sbjct 4616 ATCAACGCCGGGCGCATTCGCGCGCTGGGCAGCCCGATCCGCGGCGGCGAAGCCTTCCAC 4557 Query 9458 ACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGC 9517 || || || || || |||||||| || ||||| || || ||||||| || || ||| Sbjct 4556 ACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCGGTGAAATCCTGCTCGCAGGGC 4497 Query 9518 GGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGTGGCACCTAG-AGTACAAATC 9576 || || || |||||||||||||| | ||||||||||||||||| || | ||| ||| | Sbjct 4496 GGCGTGCGCGGCGGCGCGGCAACCCTCTTCTACCCAATGTGGCATCTGGAAGTGGAAAGC 4437 Query 9577 ACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAACCGTGTACGTCATATGGACTA 9636 || | || || || ||||||||||||| ||| | ||||| || ||||| |||||||| Sbjct 4436 -CTGCTGGTGCTGAAAAACAACCGTGGTACCGACGCCAACCGCGTTCGTCACATGGACTA 4378 Query 9637 CGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCTGTCTGGTCAGAACATCACTTT 9696 ||| ||||| || || |||||||| | ||||||||| || | || || | Sbjct 4377 CGGGGTACAGATCAACAAGCTGATGTACACCCGTCTGCTGAAGGGCGGCGATATTACCCT 4318 Query 9697 ATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATACTTCGAAGACCAAGATAAGTT 9756 ||| ||| || ||||| || || || || | ||||| || || || |||| Sbjct 4317 GTTCAGCCCTTCCGACGTCCCGGGCCTGTATGACGCCTTCTTCGCCGATCAGGACGAGTT 4258 Query 9757 CGAGCGACTGTACACCAA-----AGCGGAATCTGATCCATCAATCGAAAAAGACACAATC 9811 ||||| ||||||||| | ||| | | || || || ||| || | || Sbjct 4257 TGAGCGCCTGTACACCCAGTACGAGCAGGA--CGA--CAGCATTCG-TAAGCAGCGTATT 4203 Query 9812 TCTGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCATCTAC 9871 || || ||| | | ||||| ||||| || ||||| || |||||||| Sbjct 4202 AAAGCCGTTGAGCTGTTCTCGCTGATGATGCAGGAGCGCGCCTCTACCGGCCGCATCTAT 4143 Query 9872 ATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTCGATGAGCGCGTTGCACCAGTA 9931 || ||| |||| || ||||| |||| || | || |||||| | || || || || Sbjct 4142 ATCCAGAACGTCGACCACTGCAACACCCACAGCCCGTTCGATCCGGTAGTCGCCCCGGTG 4083 Query 9932 CGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCAAACCGTTGAATAACGTCGAT 9991 || || || ||||| || |||| || || || || ||||||||| || | | ||| | Sbjct 4082 CGTCAGTCTAACCTGTGCCTGGAGATTGCTCTGCCGACCAAACCGCTGGAAGATGTCAAC 4023 Query 9992 GATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAACTTGGGTAAGATTGAA 10051 || | || ||| | ||||| || || || || || |||||| | || || || Sbjct 4022 GACGAAAACGGCGAAATCGCGCTGTGCACCCTGTCGGCCTTCAACCTCGGGGCTATCGAC 3963 Query 10052 TCGGTTGGTGATTTTGAGCGTCTGTCTCGTATCGTTGTGCGTGCATTGGATAATCTGTTA 10111 | | || | || ||| | | | |||||||| ||||| ||| | Sbjct 3962 AGCCTCGACGAGCTGGAAGAGCTGGCAGTGCTGGCGGTGCGTGCTCTGGATGCGCTGCTC 3903 Query 10112 GACTACCAAAACTACCCATTACCTGCCGCAGAACGTTCGACAATGCGCAGACGTAGCCTT 10171 ||||| || | ||||| | || || || |||| | ||| | | |||| || Sbjct 3902 GACTATCAGGATTACCCCATCCCGGCGGCTAAACGCGGCGCGATGGGGCGTCGTACGCTG 3843 Query 10172 GGTGTAGGTATTATCAATTACGCCCACTGGGTGGCTAAGAATGGCCTAAAATACAGTGAC 10231 ||| | || | ||||| | ||| ||| |||| ||| ||||| | ||| ||| Sbjct 3842 GGTATCGGCGTGATCAACTTCGCTTACTATCTGGCGAAGCATGGCAAACGCTACTCCGAC 3783 Query 10232 GGTAGCGCAAACAACAAGACGCATGAGCTGATTGAAGCTATGCAGTTCTACTTGCTACAA 10291 || ||||| |||||| |||||| | | | ||||| || |||| ||| |||| | Sbjct 3782 GGCAGCGCCAACAACCTGACGCACAAAACGTTCGAAGCGATTCAGTACTATCTGCTGAAG 3723 Query 10292 GCATCAATGGAACTGGCTAAAGAGAAGGGTATGTGTTCTGGATTCGAAGACACTAAGTAT 10351 || || | || ||||||| ||| | || || | | ||| | || || | ||| Sbjct 3722 GCCTCTAACGAGCTGGCTATCGAGCAAGGCGCCTGCCCGTGGTTCAACGAAACCACCTAT 3663 Query 10352 GCCAAAGGTGTTATGCCAGTTGATCGTTATAAGTCTGATGTCGACAACACCCACACAGCA 10411 || | || | |||| | ||| |||||| ||| | ||| || | || | | Sbjct 3662 GCGCAGGGCATCCTGCCGATCGATACCTATAAGAAAGATCTGGACGGCATCGTCAGCGAA 3603 Query 10412 GAACTACA-GATGAATTGGAATTGGTTGCGTAATGAGATTGTCCATAATGGCCTACGTAA 10470 || || | || | |||| ||||| | ||| | | ||||| || || Sbjct 3602 CCCCTGCACTACGACTGGGAA-GCATTGCGCGAGTCCATTAAAACTCACGGCCTGCGCAA 3544 Query 10471 CTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTTCTCAGGTATCTAACGCAACAAA 10530 ||| || || || ||| | ||||| || || || || || ||| | || ||||| || || Sbjct 3543 CTCAACGCTCTCCGCACTGATGCCGTCCGAGACCTCGTCGCAGATCTCCAACGCCACCAA 3484 Query 10531 CGGCATCGAACCACCTCGTGGCTACATGTCAGT---TAAGCAGTCGAAGGATGGCATCTT 10587 |||||| || || || || ||| || || ||| |||| ||| ||||| || ||| | Sbjct 3483 CGGCATTGAGCCGCCGCGCGGC--CACGTGAGTATCAAAGC-GTCCAAGGACGGTATCCT 3427 Query 10588 AAAACAAATCGTACCGGGTTATGATAA-ATACAAAGACCAATACGAGTTACTATGGAATA 10646 || | || |||| ||| || || | || | || |||||| | || ||| | | Sbjct 3426 GCGCCAGGTGGTGCCGGATTACGAAAACCTGCAGA-ACGCCTACGAGCTGCTGTGGGAGA 3368 Query 10647 TCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATCATGCAGAAGTTTGTGGATCAGG 10706 | ||||| ||||| || | |||| | ||||||||||||||| | || ||| Sbjct 3367 TGCCGAACAACGACGGTTATCTGCAGCTGGTGGGTATCATGCAGAAGTTTATCGACCAGT 3308 Query 10707 CTATTTCAGCAAACACTAACTACGACCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCA 10766 | || || || |||||||||||||| || || ||| | || || || || Sbjct 3307 CGATCTCTGCCAACACTAACTACGATCCGACGCGCTTCCCGTCCGGAAAAGTGCCGATGC 3248 Query 10767 AAAAGTTATTGCAAGATTTGGTGACATGTTATAGACTCGGCATCAAGACACTGTACTACC 10826 | |||| | |||| || | | |||| | ||||| |||| || |||||||| | Sbjct 3247 AGCAGTTGCTCAAAGACCTGCTCAACGCCTATAAATTCGGCGTCAAAACGCTGTACTATC 3188 Query 10827 ACAACACACGAGATGGTGCT 10846 ||||||| || ||||| ||| Sbjct 3187 ACAACACCCGTGATGGCGCT 3168 >seq4092 Length=20610 Score = 107 bits (118), Expect = 1e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 6187 CATGATATGGATGAGTCGCCGTTCTACCCGATGTTCAACTGCTGTTTGGTCGATCTTAAA 6246 ||||| | ||| | ||||| |||| |||||||||||||||| || ||||||| ||| Sbjct 17673 CATGACCTCGATTACTCGCCCTTCTTCCCGATGTTCAACTGCATGCTGATCGATCTGAAA 17614 Query 6247 GGTATGTTGGCGAATGGGTTTATGATGGGTAACGCAGACATCGAAACCCCTAAGTCAATC 6306 || ||| || | | || |||| |||||| ||||| || ||||| | || ||||| ||| Sbjct 17613 GGCATGCTGACCCAGGGCTTTAAGATGGGCAACGCGGAGATCGAGCCGCCGAAGTCTATC 17554 Query 6307 TCAACTGCGTGTGCTATCACTGCACAAATTATCGCTCAGGTTGCGTGCCACCAATACGGT 6366 || || || || | || || || || ||||| ||||| || |||| ||||| Sbjct 17553 TCTACCGCCACCGCGGTGACGGCGCAGATCATCGCCCAGGTCGCCAGCCATATTTACGGC 17494 Query 6367 GGGGTTAGCCTCAATCGTCTTGATGAGGTGTTGGCACCATACGT 6410 || | | |||| || | ||||| ||| |||| || | ||| Sbjct 17493 GGCACCACCATCAACCGCATCGATGAAGTGCTGGCGCCGTTCGT 17450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342854811676313