Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq2422 444 3e-120 seq25107 423 1e-113 seq7253 414 5e-111 seq20784 405 3e-108 >seq2422 Length=24180 Score = 444 bits (492), Expect = 3e-120 Identities = 674/946 (71%), Gaps = 16/946 (2%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || ||||||||||||||| | |||||| || |||||||||||||||||||| | ||| Sbjct 7824 GCAATCAACTGGAACCGCATTGATGACGATAAAGATCTTGAGGTCTGGAACCGTCTCACC 7883 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | ||||||||||||||| ||||| | || | || |||||||| || |||||| || Sbjct 7884 AGCAACTTCTGGCTGCCGGAGAAAGTGCCGCTGTCGAACGACATTCCCGCCTGGCAAACC 7943 Query 59386 CTGACGGAGGAAGAGCA--AGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCG 59443 || | | || ||||| ||| | || || || ||||| ||||| |||| |||| | Sbjct 7944 CTCAGCGCGGCGGAGCAGCAGT--TGACCATTCGCGTCTTTACCGGATTGACCCTGCTTG 8001 Query 59444 ACACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACG 59503 |||| || ||| |||||| || || | || || | ||||| | || ||||| | Sbjct 8002 ACACCATTCAGAACACCGTCGGCGCCCCGGCGCTAATGGCGGACGCCTTAACCCCGCATG 8061 Query 59504 AGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCA 59563 ||||||||||| |||||||| || |||||| |||| || || |||||| Sbjct 8062 AGGAGGCGGTGCTGTCGAACATCAGCTTTATGGAGGCGGTTCATGCCCGCTCTTACAGCT 8121 Query 59564 ACATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGG 59623 |||||| || ||||||||| |||||| | || || || ||| |||| | | Sbjct 8122 CCATCTTTTCCACGCTGTGCCACAGCAAGGAAGTGGATGCCGCCTTCGCCTGG--AGCGA 8179 Query 59624 AGAATCCGAAC--CTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGA 59681 | | ||| | ||||| |||||||| ||| | | |||| ||||| |||| ||||| Sbjct 8180 AAGCTGCGATCCTCTGCAGCGCAAGGCGCAGCTGATGCTGGGTTACTATCAGGCCGACGA 8239 Query 59682 TCCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTT 59741 ||||||||| || | ||| ||| || || || || |||||||| ||||| Sbjct 8240 GCCGCTGAAGAAAAAAATCGCCAGCGTGTTCCTCGAATCCTTTCTCTTCTACTCCGGCTT 8299 Query 59742 CTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATCCG 59801 || ||||||||||||| || || ||||| |||||||| ||||| || || ||||||| Sbjct 8300 CTGGCTGCCGATGTACTTCTCCAGCCGGGGAAAGCTGACCAACACTGCGGATCTGATCCG 8359 Query 59802 GCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGG 59861 || |||||||| || || |||||||| ||||| |||||||| ||||||| |||| || Sbjct 8360 CCTGATCATTCGCGATGAAGCGGTGCATGGCTATTACATCGGCTACAAGTACCAGAAAGG 8419 Query 59862 CCTGGAGA--CTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTG 59919 ||||||| |||| | ||| | ||||| || |||| | | | | || |||| Sbjct 8420 ACTGGAGATCGTCAG-CCCCGGCAAG-CGCGAAGAATTGAAAAATTTCGCCCTCGATCTG 8477 Query 59920 CTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGA 59979 || | || | ||||||||||| | | |||| | ||| ||||||| | | | | | Sbjct 8478 CTGATGGATCTTTACGACAACGAACTGGCCTACAGCCGGGAGCTGTACGGC-GAGAGCGG 8536 Query 59980 CTGACT-GAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCT 60038 ||| | || || |||| |||||| |||||||||||||||| ||||||||||| || Sbjct 8537 CTGGTTCGACGACGTCAGCGCTTTCCTGTGCTACAACGCCAACAAAGCGCTGATGAACCT 8596 Query 60039 CGGCTACGAGGCGCTGTTCCCGCGCGACGA-AACCGAGGTGAATGCGGCGATCTTGGCGG 60097 |||||||||||||||||||||| ||| || | | ||| ||| |||| ||| | || | Sbjct 8597 CGGCTACGAGGCGCTGTTCCCG-GCGGAGATGGCGGCGGTCAATCCGGCAATCCTCGCAG 8655 Query 60098 CACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATG 60157 | ||||| || || ||||| ||||| ||||| ||||| || || ||| | | || | Sbjct 8656 CGCTGTCGCCCAACGCCGACGAAAACCATGACTTTTTCTCCGGTTCCGGCTCCTCCTACG 8715 Query 60158 TGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCTA 60203 |||| || || || | || | ||||| ||||||||||| || Sbjct 8716 TGATAGGAAAAATGGAAGAGACCGCCGACGACGATTGGGACTTTTA 8761 >seq25107 Length=428 Score = 423 bits (468), Expect = 1e-113 Identities = 345/419 (82%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 ||||||||||||||||| |||||| | || | || |||||| | | | | ||| |||| Sbjct 10 AACAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACG 69 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || || || ||||| | ||||| |||||||| |||||||| || ||| |||||||| Sbjct 70 CTCACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGTCTCACGTTGCTCGAC 129 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 |||||||||||||||||||| || ||| |||||||| ||||||||||| || ||||| Sbjct 130 ACGATCCAGGGCACCGTGGGCGCGGTGTCGCTGATCCCCGACGCGATCACCCCTCACGAA 189 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 190 GAGGCCGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACTCCTCG 249 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 ||||||||||| || ||| | ||||||||||||| ||||||||||||||| ||| Sbjct 250 ATCTTCTCGACCCTCGCGTCGACGAAGGAGATCGACGAGGCGTTCCGCTGGTCCACCGAG 309 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || |||||||| || |||||||||||| || |||||||||||||||| ||||| ||| Sbjct 310 AACCCGAACCTTCAGAAGAAGGCTCAGATCATCATGGACTACTACCAGGGCGACGACCCG 369 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTA 59744 || ||||| ||||||||||| || | |||||| |||||| ||||||||||||||||| Sbjct 370 CTCAAGCGCAAGGTGGCCTCCACCCTTCTGGAGTCGTTCCTCTTCTACTCGGGCTTCTA 428 >seq7253 Length=766 Score = 414 bits (458), Expect = 5e-111 Identities = 348/427 (81%), Gaps = 0/427 (0%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 |||||||||||||| |||||| ||||| ||||| ||||| ||| | || | | Sbjct 340 GCCATCAACTGGAATCGCGTCCAGGACGAGAAGGACGCCGAGGTATGGGATCGCCTCGTC 399 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | ||||||||||||||| || ||| | || |||||||||||||||||| ||||||| ||| Sbjct 400 AGCAACTTCTGGCTGCCCGAAAAGGTGCCGGTCTCCAACGACATCCCGTCCTGGGGAACG 459 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 ||||| | | | ||||| ||||| ||||| |||||||| ||||||||| |||||||| Sbjct 460 CTGACCGCGCAGGAGCAGCAGCTCACCATGCGCGTCTTCACGGGCCTGACGCTGCTCGAC 519 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 || |||||||| || || || || || ||||| ||||| ||||||||||| || ||||| Sbjct 520 ACCATCCAGGGAACGGTCGGCGCCGTCAGCCTCATCCCGGACGCGATCACTCCCCACGAA 579 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 || ||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct 580 GAAGCGGTGTACACCAACATCGCCTTCATGGAATCGGTGCACGCGAAGAGTTACAGCTCG 639 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||||||||||||||| || || ||||||| ||||||||||||||||||||| Sbjct 640 ATCTTCTCGACGCTGTGCTCCACCCCCGACATCGACGACGCGTTCCGCTGGTCGGAGGAG 699 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || || |||||||| |||||||| |||||||| || ||||||||| | || || ||| Sbjct 700 AACCCCAACCTGCAGCGCAAGGCGCAGATCGTTCTCGACTACTACAACGGCGAGTCGCCG 759 Query 59686 CTGAAGC 59692 || |||| Sbjct 760 CTCAAGC 766 >seq20784 Length=1386 Score = 405 bits (448), Expect = 3e-108 Identities = 367/460 (80%), Gaps = 4/460 (1%) Strand=Plus/Minus Query 59745 CCTGCCGATGTACTGGTCTAGTCG--GGGGAAGCTGACGAACACGGCCGACATGATCCGG 59802 ||||||||| || ||||| ||| || |||||||||||||||||||||| ||||||| Sbjct 1386 CCTGCCGATCTATTGGTCC--TCGAAGGCGAAGCTGACGAACACGGCCGACCTGATCCGC 1329 Query 59803 CTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGC 59862 |||||||| || |||||||| |||||||| ||||||||||| |||||||||||| ||| Sbjct 1328 CTCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGC 1269 Query 59863 CTGGAGACTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTA 59922 || |||| ||| | ||| |||||||| ||||| ||||||||||||| | || | Sbjct 1268 CTCGAGAACGAGACCCAGGAGCGCCGCGATGAGCTCAAGGACTACACGTTCTCGCTCATG 1209 Query 59923 CTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGACTG 59982 |||| | |||||||||||| | ||||||||||||| || |||||||| || || ||| Sbjct 1208 TACGAGCTCTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGTGTCGGTCTG 1149 Query 59983 ACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGC 60042 || || || || |||| |||||||| |||||||||||||||||| || ||||| || ||| Sbjct 1148 ACCGAAGACGTGAAGAAGTTCCTGCACTACAACGCCAACAAGGCCCTCATGAACCTGGGC 1089 Query 60043 TACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTG 60102 ||||||||| ||||||| | || || | ||||| |||||||| || ||||||| Sbjct 1088 TACGAGGCGATGTTCCCCTCCAGCGTCACGAACGTGAACCCGGCGATCCTGTCGGCACTC 1029 Query 60103 TCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATT 60162 || || || |||||||||||||||||||||||||| || ||| |||| || || Sbjct 1028 TCGCCGAACGCCGACGAGAACCACGACTTCTTCTCGGGGTCAGGCTCGTCGTACGTCATC 969 Query 60163 GGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 |||||||| |||| ||||||||||| || |||||||||| Sbjct 968 GGCAAGGCCGAGGCCACGGAAGACGACGACTGGGACTTCT 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258842123378652