Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq19415 129 1e-25 >seq19415 Length=1017 Score = 129 bits (142), Expect = 1e-25 Identities = 241/342 (70%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 10369 CCTTCGAGGGGTTCGTTATCGAGCGCGTGAAGGCAG-GCCCATGCGAGGTCAGCGTGGCC 10427 ||||| ||||||||||| | |||||||| | ||| ||||| || ||||| || ||||| Sbjct 652 CCTTCAAGGGGTTCGTTGTGCAGCGCGTGGAA-CAGCGCCCACGCTAGGTCGGCATGGCC 710 Query 10428 GATTTCTTCGTTACGCGCGGCGGTGTAGGTCATCTTCGTGCCGCTCGGCG-TCATGGCTC 10486 | || || | || |||| ||||| || | | | | ||| |||| | || | | Sbjct 711 CGTCTCGTCTGTGCGACCGGCCGTGTAAGTGAACAT-GCGCCCGGAGGCGGTGATTGTTT 769 Query 10487 GGCGGATGGACAGGAACGATTGCGCGAGGTCGGTCATACCTGCGTCGAATTCCAGGC-GC 10545 |||||| | || || || ||||| | || ||| || || ||||| ||||| | || Sbjct 770 TGCGGATAGCCATCAATGACTGCGCCATATCCGTCCAGCCCGCATCGAACTCCAGCCTGC 829 Query 10546 --TTTTTCCCGATCACCGACAT--GCCTTTCAGGACAAGGCGGTTTTTCACTTCGGGCGA 10601 ||||| ||| || | | | ||||| ||| || |||||| |||| |||||||| || Sbjct 830 CGTTTTT---GATGAC-GTCGTAAGCCTT-CAGCACCAGGCGGGTTTTGACTTCGGGTGA 884 Query 10602 GTAATTGATCGGTACGACGCGCGGGAAGAACTGGCGCACAAGCTGATGCACGCCGTGACC 10661 ||| ||| || || | |||||||||||| ||| ||||| ||||||| ||| Sbjct 885 GTAGCTGAACGTGGTGATGTTCGGGAAGAACTGCTTCACCAGCTGCGCCACGCCGGAACC 944 Query 10662 GATGCCGGTCGTATCGATCGCGATATAGGTCACGTGGTAGCG 10703 ||||||| |||||||| |||| |||||||| |||||| Sbjct 945 CGTGCCGGTGATATCGATCCCGATGTAGGTCACCCAGTAGCG 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113216437620608