Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq6038 82.4 2e-11 seq347 80.6 8e-11 >seq6038 Length=789 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 3875 GGTCTTTTAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAG 3934 ||||| | |||| ||||||||||||| ||||| |||||||||||| |||| || ||||| Sbjct 403 GGTCTCTAGGGCG-GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAG 461 Query 3935 GTTCGAGTCCTG-CCGC 3950 |||||| ||||| |||| Sbjct 462 GTTCGATTCCTGTCCGC 478 >seq347 Length=20085 Score = 80.6 bits (88), Expect = 8e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 3882 TAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAG 3941 |||| | |||||||| ||||||||||||||||||||||| ||| || |||||||||| Sbjct 16292 TAGGGGAGTAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCGCAGGTTCGAA 16233 Query 3942 TCCTGCCGCGTCTGCTACT 3960 ||||| | | |||| ||| Sbjct 16232 TCCTGTCTCCCCTGCCACT 16214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146843562176096