Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021563.1 Length=42724 Score E Sequences producing significant alignments: (Bits) Value seq373 125 2e-24 >seq373 Length=63667 Score = 125 bits (138), Expect = 2e-24 Identities = 201/286 (70%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 25541 TATGCAAGACAAAGAGAGCATGACGTGGCTTTCGTGGGCTATCGTTGCTGG-CATTGCTT 25599 ||||||||||||||| |||||| | | | | ||| || | ||||| ||||||| Sbjct 8225 TATGCAAGACAAAGAAAGCATGGCCGGAATCACCTGG-CTGGCTCTGCTGATCATTGCTG 8283 Query 25600 GCTGGGGCGGCCTTGTTCGCTACTTGATAGATATCAGGCAGAGTAAGGCGGTGTGGAGCT 25659 | |||||||||||||| || | | |||| ||| | | |||| | || || ||||||| Sbjct 8284 GTTGGGGCGGCCTTGTCCGATTCCTGATGGATGTGAAGCAGGGCAAAGCAAAATGGAGCT 8343 Query 25660 GGGCTAACGCTATTGCGCAAGTTGCGGTGTCTGGGTTCACCGGTGTTATTGGTGGATTGG 25719 || || ||| |||||||| ||| ||| || | || ||||| || |||||||| | Sbjct 8344 GGATAAATGCTTTTGCGCAAATTGTGGTTTCGGCTTTTACCGGGGTCATTGGTGGGCTCA 8403 Query 25720 TTAGCGTAGAGTCAAGCCTTAGCCTGCACATGGTTTTCGCCGTAGCTGGTATTAGCGGTT 25779 | ||| | || |||| || | ||||| | | ||| || ||| |||| ||| Sbjct 8404 TCAGCATTGAAAGTGGCCTGAGTATTTACATGATACTGGCCACTGCCGGTGTTAGTGGTG 8463 Query 25780 CGATGGGTTCTGTCGCGCTCACTTTCTTCTGGGAACGCATAACGGG 25825 | |||||||| || ||||| || | ||||||||||| || || || Sbjct 8464 CTATGGGTTCCGTAGCGCTTACATATTTCTGGGAACGAATCACCGG 8509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136549413886564