Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq20280 91.5 7e-14 seq4821 86.0 3e-12 seq501 82.4 4e-11 >seq20280 Length=806 Score = 91.5 bits (100), Expect = 7e-14 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 62528 TGGAAGATTCCGCTCAGTGGTGGGCAATCCGGTTTGAACCCGGAGGTGCTGGTAACGGTA 62587 |||||| | ||| ||||||||||||||||||||||||||||||| | || ||||||| Sbjct 626 TGGAAGGTGGCGCCCAGTGGTGGGCAATCCGGTTTGAACCCGGAGCTATCGGAAACGGTA 567 Query 62588 GGGGTTCGACTCCTCAATCTTCCGCCAA 62615 | ||||||||| | | |||||||||| Sbjct 566 AGAGTTCGACTCTTTCACCTTCCGCCAA 539 >seq4821 Length=4025 Score = 86.0 bits (94), Expect = 3e-12 Identities = 164/240 (68%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 8030 TGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAACCTTACTG 8089 |||| || || || || || ||||| ||||||||||| ||||| || || ||||| | Sbjct 2554 TGATCCTGCCGCGCTCCGGCCTGGGTCATAAGCATGGCGTAGTCCTGGGCAACCTGGTGG 2495 Query 8090 GTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGC--TCTAC 8147 | || || || || || || ||||| | || ||||| | ||||||| ||| || | Sbjct 2494 GCCTTATCGACTCCGATTACCAGGGGCAGCTGATGGTGTCCGTCTGGAACCGCGGTCAGC 2435 Query 8148 AGAGCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCTGTAAT 8207 ||||| |||| | | | || || || ||||| || |||||||| | ||||| || | Sbjct 2434 AGAGC--TTTATTATCGAGCCGGGCGAACGTATCGCACAGATGGTCTTTGTGCCGGTCGT 2377 Query 8208 GCAGCCTGAGTTCGTTGTAGTGGATTCATTTGAGTCTACCAAACGAGGTGCTGGTGGCTT 8267 ||| | || || | ||||| || || || | ||| | || || | || ||||| Sbjct 2376 TCAGGCGGAATTTAACCTGGTGGAATCCTTCGATGCCACCGACCGCGGCGAAGGCGGCTT 2317 >seq501 Length=12468 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||| ||||||||||| ||||||||||| | |||||| ||||||||||| Sbjct 11106 CCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 11047 Query 63091 GTAGGGTGTACCA 63103 |||||| || ||| Sbjct 11046 GTAGGGCGTGCCA 11034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230509473633673