Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq27510 385 1e-102 seq4405 214 5e-51 seq2322 176 1e-39 seq44 136 1e-27 seq422 125 2e-24 seq4332 122 2e-23 seq3980 116 1e-21 seq373 102 2e-17 seq4417 89.7 1e-13 seq62 89.7 1e-13 seq501 80.6 7e-11 >seq27510 Length=253 Score = 385 bits (426), Expect = 1e-102 Identities = 216/218 (99%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 39779 GGTTGCCATTGTGGCGATGCTTCTTGCTCCGGCCGAACCGTGGCTGATGCCATGTAGCTC 39838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 253 GGTTGCCATTGTGGCGATGCTTCTTGCTCCGGCCGAACCGTGGCTGATGCCATGTAGCTC 194 Query 39839 AAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGTTTTTCAGGACGGTTTTTCCA 39898 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 193 AAGTACCTGACTGCGTAATACAGCCCGTCTGCAGTCTGGTTTTTCAGGACGGTTTTTCCA 134 Query 39899 GTATCTGTAGCTGCTGCGATGAACCCCGAACACATGGCAGAGTGTGACCATAGGATAATG 39958 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 133 GTATCTGTAGCTGCTGCGATGAACCCCGAACACATGGCAGAGTGTGACCACAGGATAATG 74 Query 39959 CGCTCTGAGTTTCCCGATTATCGAGAACTGTTCAGGGA 39996 |||||||||||||||||||||||||||||||||||||| Sbjct 73 CGCTCTGAGTTTCCCGATTATCGAGAACTGTTCAGGGA 36 >seq4405 Length=8230 Score = 214 bits (236), Expect = 5e-51 Identities = 133/143 (93%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40208 GTGTATTTCTGGTCAACAACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTAAAATTT 40267 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 8228 GTGTAGTTCTGGTCAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTT 8169 Query 40268 CtttttttCATTGGAGCACCTGTGTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 40327 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8168 CTTTTTTTCATTATGACACCTGTGTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 8109 Query 40328 GCCAAATTCAGTGTGCCACTTCA 40350 |||||||||||| |||||||| Sbjct 8108 GCCAAATTCAGTAAACCACTTCA 8086 >seq2322 Length=24874 Score = 176 bits (194), Expect = 1e-39 Identities = 106/112 (95%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 39100 ATGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGA 39159 ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || Sbjct 112 ATGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGGTTTTCTGA 53 Query 39160 TTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAA 39211 ||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 52 TTCGTTTGGCGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAA 1 >seq44 Length=21063 Score = 136 bits (150), Expect = 1e-27 Identities = 337/500 (67%), Gaps = 15/500 (3%) Strand=Plus/Plus Query 39275 GGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAG 39334 |||| |||||| | |||||||| | |||||||||||||||||| ||||||||||||||| Sbjct 20096 GGCACCCATTCTGTTTTCAGACTGCGGAAGAAGCGTTCCATTGGACTGTTATCCCAGCAG 20155 Query 39335 TTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCCGGAACTG 39394 ||||| || ||||| | ||| || | ||| ||| ||||| | || | | | | Sbjct 20156 TTTCCCCGTCGGCTGACACTTTGCTTTATCCTGTAACGCCA-GAGAAGTTGTTGATATTT 20214 Query 39395 CCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCAC--CCCGCCGGGCTTACCA 39452 | | ||||| ||||| ||||| ||||| |||||||| || ||||| |||| |||| Sbjct 20215 CAGTCCTGTATATTGACTTCCCTGGTCGCTATGGAACATGACGTCCCGC--GGCTGACCA 20272 Query 39453 CGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGT-CCGGCGAGAAC-G 39510 || || | ||||| ||| || | | | || || || |||| | | Sbjct 20273 CGCACCTCATACGCCATCCGCAGGGCACTGCTTATCAG--GGCAGTATCGGCATTCGCTG 20330 Query 39511 ACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCC 39570 ||| | |||||| | | | || || || || | || || || || || || Sbjct 20331 ACAGGCTCCAGCCGATAACCCTGCGGGCAAAAAGATCCATGACGACCGCCAGATAGCACC 20390 Query 39571 AGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCA 39630 |||| || || | ||||||||| || | ||| |||||||| ||| || |||||||| || Sbjct 20391 AGCGATTTCCTGCCCAGATATACGTAATATCTCCGCACCATACCCTATCTGGCTCGGGCA 20450 Query 39631 CGGCGAACTGCCTTTCAAGGTAGTTAGGGATAGCA-ACATGTTCATGACCACCACGTTTA 39689 | |||||||| | |||| | || | || ||| |||||| |||| | || ||| Sbjct 20451 CAGCGAACTGGCGCTCAA-GCAGATTCGGCAGGCAGGTATGTTCCTGACGAGCATTTTTG 20509 Query 39690 TACCGGTGAGT--CGGCTGCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGCCTGCCAG 39747 ||| | || | ||| ||||||| ||| ||| ||| | |||||| || | || | Sbjct 20510 TACTGATGTTTTCCGG--GCTGACAACTGCTCAGGTTCAGATATTTCATCAGACGCCCGG 20567 Query 39748 CAAGCCAGCGTCCCATCTGG 39767 || | | || | |||| || Sbjct 20568 CACGGTAACGGCTCATCGGG 20587 >seq422 Length=1870 Score = 125 bits (138), Expect = 2e-24 Identities = 161/217 (74%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 37253 CGTACGCAAAAATTATTG--TATCGTGTTAAGAGTGGTTACTTCGCCACACAGCTTAAAC 37310 |||||| ||||| |||| ||| |||||||||||||||||||| |||||||||||||| Sbjct 310 CGTACGTAAAAA--ATTGGTTATGCTGTTAAGAGTGGTTACTTCGTCACACAGCTTAAAC 253 Query 37311 CCGCCGTCGAGCGGGTTTTGTC-GTTTCTGGGGCTGGGGATTCGTTGGTCCTGGTCTATT 37369 |||||||||||| |||||| | ||| || | || | ||| | || | || || Sbjct 252 CCGCCGTCGAGCTGGTTTTTCCATTTTTTGAGTCTCGATATTAGCTGAT--AACTCAATA 195 Query 37370 CCGCAGTTATCCATTGGTTCGGCTTCTTTGACGTTTCCGCTTCTAATTTGCTGTACATGA 37429 || |||||| || || || | ||| | ||||||| |||| ||||| ||| | Sbjct 194 CCTGAGTTATTCACTGACTCCGAGTCTGTTACGTTTCTGCTT---TTTTGCGATACGTTG 138 Query 37430 TGTTCCCTCAATTTGCACCTGCTGTATCAGCGAGGTG 37466 | |||||||||||| |||| ||| | || |||||||| Sbjct 137 TATTCCCTCAATTTACACCCGCTTTGTCTGCGAGGTG 101 >seq4332 Length=4020 Score = 122 bits (134), Expect = 2e-23 Identities = 299/449 (67%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 8822 CGGTTCACGATGACCGAGCAGCAGACCCTGCTGTCTCATGGCGTGGCAACGGCGTATGTC 8881 || ||||| ||||||||| || | ||||| | ||| | || || || || | Sbjct 3678 CGCTTCACTCTGACCGAGCGCCAATCGCTGCTCAACTACGGCATCGCCACCGCTTACTAC 3619 Query 8882 GAAAGCGGGGTGCTGCGCATTCAGCGTGATGTCACCACGTACAGGAAAAATTCTTACGGG 8941 ||| |||| ||||||||||||| | ||||||| ||| ||| || | | ||| Sbjct 3618 GAAGGCGGTTACGTGCGCATTCAGCGGGCCATCACCACTTACCAGAAGAACGCGTTCGGC 3559 Query 8942 GTTGCGGATAACAGCTACCTCGACAGCGAGACGCTGCATACCAGT--GCGTATGTACTGC 8999 ||||| || ||| || |||||||| || ||||| ||||| || | | | ||| Sbjct 3558 CAGGCGGACAATTCCTATCTGGACAGCGAAACCCTGCA--CCAGTCGGCCTTTATCGTGC 3501 Query 9000 GCAAACTGAAATCCGTCATTACCAGTAAGTACGGGCGTCACAAGCTTGCCAGCGACGGTA 9059 || ||| | ||| || ||||| ||||||||||| ||||| || || ||||| | Sbjct 3500 GCCGCCTGCAGAGCGTGATCACCAGCAAGTACGGGCGCCACAAACTCGCTGCTGACGGCA 3441 Query 9060 CCCGCTTTGGTCCCGGTCAGGCGATTGTCACCCCGGCGGTAATCAAAGGGGAACTGCTGG 9119 | |||||||| |||| ||| |||| ||||||||| ||| || || ||| | | Sbjct 3440 CGCGCTTTGGCGCCGGCCAGCCGATCGTCACCCCGAGCACCATCCGCGGTGAGCTGATTG 3381 Query 9120 CAACCTACCGTCAGCTTGAGCGTGCGGGGATCGTGGAAAACTACGAACTGTTTAAGCAGT 9179 | ||| |||| || | | || ||||| ||| ||| ||||| || Sbjct 3380 CCCAGTACGCCAAGCTCGAACTGGAAGGCCATGTGGAGAACGCCGAGCTGTTCGCCGAGC 3321 Query 9180 ACCTGGTTGTGGAGCGTGA-TGCCAGCGATCCGAACCGCCTGAACACGCTGTTCCCGCCT 9238 ||||| | || ||||| || ||||| || |||| ||| | ||| |||||||||||| Sbjct 3320 ACCTGATCGTCGAGCGCGACAGCCAG-GACCCGAGCCGGGTCAACGTGCTGTTCCCGCCG 3262 Query 9239 GACTATGTTAACCAGTTGCGTGTTTTTGC 9267 || || || ||| | |||| || || || Sbjct 3261 GATTACGTCAACGGGCTGCGGGTGTTCGC 3233 >seq3980 Length=16791 Score = 116 bits (128), Expect = 1e-21 Identities = 257/385 (67%), Gaps = 13/385 (3%) Strand=Plus/Minus Query 39977 TATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCA 40036 ||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 16382 TATCGTGAACCGTTCAGCGAGTCGGACATCAAGAGCGCGGTAGCCTTTTTTAATATCGTA 16323 Query 40037 TTCTCCATTTCAATGCGTTGTAGCT--TTTTCCTGAGCTCACGGATTTCAATTTGTTCCG 40094 |||| | || | ||| | | || |||||| ||||| ||||| || || | Sbjct 16322 TTCTGCTCCTCCAGGCGACGAACCTGCTTTTCC--AGCTCGCGGATACGTTGCTGGTCTG 16265 Query 40095 GGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGACGCTCATCACGCAGTTGTTTGACCC 40154 | ||||| || | ||| || || | ||||| ||||| | || || |||| Sbjct 16264 GAGTAATAGGTGTGGCAGAGGGCGTAATCCCCTGGCGCTCTCGCCTGAGCTGGCGTACCC 16205 Query 40155 ATCTTGTCATTGTGGAAAGGCCAACATCCATAGCTTTGGCGGCATCTGCCACCGTGTATT 40214 | || | |||| | || |||| ||| |||| ||| | | | ||| Sbjct 16204 AGCTCTCAAGCGTGGTAGAACCGACATTCATCGCTTCACTGGCTTGTCGATAGGAGTAGC 16145 Query 40215 TCTGGTCAACAACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTAAA---------AT 40265 || ||||||| ||| || || |||| | | ||||| | | | || | Sbjct 16144 CCTTATCAACAATCAGCTGTGCACATTCCAGCCTGAACTCGGGGGTGAAAGTACGCTTAG 16085 Query 40266 TTCtttttttCATTGGAGCACCTGTGTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGG 40325 || | || |||||| ||||||| |||| ||||||||| ||||||||| | ||||| Sbjct 16084 TTTTCTTGTTCATTAAGTCACCTGTTTTGTGTTGAGGTGAGAATATCACCTTTAATCAGG 16025 Query 40326 TGGCCAAATTCAGTGTGCCACTTCA 40350 |||||||||| | ||||||||| || Sbjct 16024 TGGCCAAATTTACTGTGCCACTACA 16000 >seq373 Length=63667 Score = 102 bits (112), Expect = 2e-17 Identities = 475/739 (64%), Gaps = 29/739 (4%) Strand=Plus/Plus Query 632 TACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTGTG 691 || || ||||| ||||| || || |||||||| || ||| |||| |||| |||||| || Sbjct 13820 TATCCGAACGTCAATGCGGCGAACCAGTATGCGCGGGATATCGTTGGCGGGAAGATTCTG 13879 Query 692 GCCTGCCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCT-GATGGCGGAAAA 750 || || ||||| | | | ||||| ||||| ||||| || ||||| || | | ||| Sbjct 13880 GCGTGTCAGTTAACGGTACTTGCCTGTCAGCGACATCTGGACGACCTCGAACGAGCAAAG 13939 Query 751 AAGTAAGTCGTTTCGTTACCGCTTCGACAAAGACCTGGCTGAACGGG--CCGCGAAATTT 808 | | | | ||||||||||| ||| || || ||||| | || ||| Sbjct 13940 GATCCCCAC-TGGCCCTACCGCTTCGATAAAAACAAAGCAGAACGATTTCTTCGT--TTT 13996 Query 809 ATTCAGCTGTTGCCACACACCAAGGGGGAGTGGGCATTC---AAAC---GGATGCCCATC 862 ||| |||| || ||| ||||| ||||| |||| |||| | Sbjct 13997 GCCCAGAAAATGCCTCATACCTCAGGGGAATGGGCCCGGCGTAAACTCCGGAT-----TG 14051 Query 863 ACGCTGGAGCCGTGGCAGCTCTTTGTGATCTGCTGCGCGTTTGGCTGGGTCAATAAAGGC 922 | || |||| |||||| || | | || ||||||| ||||| || || Sbjct 14052 AATTTGAAGCC-TGGCAGAAGTTCGCTCTTGGCGTACCGTTTGGATGGGTAAACAAGAAG 14110 Query 923 TCCCGGCTGCGCCGCTTCCGTGAGGTGTATACCGAAATCCCCCGTAAGAACGGCAAATCG 982 | | ||||| || ||| ||| | |||| ||| | ||| | |||||||| ||||| Sbjct 14111 ACAGGCCTGCGTCGTTTCTCTGAAATCTATATCGAGGTGCCCAGGAAGAACGGGAAATCC 14170 Query 983 GCAATCTCTGCCGGTGTCGCCCTGTAT-TGTTTTGCCTGT-GATAACGAGTTTGGCGCGG 1040 || || | || | ||| | ||| ||||||| || ||| |||| ||| || | Sbjct 14171 GCTATTGCCGCTGCTGTAGGAAATTATATGTTTTG--TGCAGATGGCGAGCATGGTGCAG 14228 Query 1041 AAGTGTATTCCGGTGCCACGACAGAGAAACAGGCGTGGGAAGTCTTTCGCCCGGCTCGAC 1100 |||| |||| ||| |||||||| || |||||||| ||| | || ||| ||||| | | Sbjct 14229 AAGTCTATTGCGGCGCCACGACTGAAAAACAGGCATGGAAGGTATTTTCTCCGGCGCTGC 14288 Query 1101 TGATG-TGTAAACGCACACC-CATGCTGACGGAAGCGTTCGGGATTGAGGTTAACGCCTC 1158 ||| || ||| || | ||| || | || ||| ||| | | || Sbjct 14289 AAATGGTGAAAAAGCTGCCGGCAT--TGCGGCAAAAATTCTCGATAAAACCTTGGGCAAA 14346 Query 1159 AAACATGAACCGTCCGGAGGATGGCGCGCGGTTTGAACCGCTGATCGGTAACCCCGGTGA 1218 ||| |||| || || || | | || |||| || |||||||| |||| || || Sbjct 14347 AAAAATGACGCGCCCTGACGGTT---CGGTTTTTGCGCCTGTGATCGGTGACCCGGGGGA 14403 Query 1219 TGGTTCATCACCCCACTGTGCGGTGGTGGATGAATATCACGAGCATGCCACCGATGCGCT 1278 |||| || || || || | | |||||||||||||| ||| | || |||||||| Sbjct 14404 TGGTGATTCGCCATCATGCGCCATCATTGATGAATATCACGAACATACTACTGATGCGCT 14463 Query 1279 TTATACCACAATGCTTACCGGGATGGGGGCGCGACGTCAGCCACTGATGTGGGCCATCAC 1338 ||| || || ||| ||||| |||||||| || || || ||| | |||||| Sbjct 14464 TTACACTACCATGACCACCGGTATGGGGGCTCGTGAACAACCGATGACACTGATCATCAC 14523 Query 1339 CACCGCCGGGTACAACATT 1357 ||||||||| || ||||| Sbjct 14524 CACCGCCGGCTATGACATT 14542 Score = 84.2 bits (92), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 2076 CCAATATGTCCGACCCGATGAAAGAGCTGGAGGCAGCGATTGAATCGGGACGCTTTCATC 2135 || ||||| || || |||| |||| | ||||| ||| | ||||| | || |||| Sbjct 15267 CCCATATGAGTGATCCTATGAGAGAGATTGAGGCTGCGCTCATCTCGGGGAGATTCCATC 15326 Query 2136 ATGACGGCAATCCCATCATGACCTGGTGTATCGGCAATGTGGTCGGCAAAAACATGCCAG 2195 ||||||| | || |||||| ||||||||| |||| | |||||| | || | || | Sbjct 15327 ATGACGGACACCCTGTCATGAACTGGTGTATTTCCAATATCGTCGGCCAGTACCTTCCCG 15386 Query 2196 GTAACGATGATTTAGTGAAGCCCGTCAAAGAGCAGGCGG-AAAACAAAATCGATGGTGCA 2254 | | || ||| | ||| |||| ||||| ||||| | ||||| || |||||||| Sbjct 15387 GAAGTGACGATATTGTGCGTCCCGGGAAAGA-AGGGCGGCAGAACAAGATAGATGGTGCG 15445 Query 2255 GTTGCGCTGATTATGGCGGTTGGCAGAGCCATGCT 2289 |||| | || |||| | | || | |||||||| Sbjct 15446 GTTGGTTTAATGATGGGGCTGGGGCGCGCCATGCT 15480 >seq4417 Length=982 Score = 89.7 bits (98), Expect = 1e-13 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 39262 GTAACCCACCACCGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCT 39321 |||||| | | || ||||| || ||||| || | || | ||| ||||| || Sbjct 772 GTAACCAGTCGCTGGAATCCACTCTGATTTCAGGCTGCGAAACAGGCGCTCCATCGGCGA 713 Query 39322 GTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAA 39381 ||||||||||||||| || || || ||||| |||||| |||| |||| ||||| | Sbjct 712 GTTATCCCAGCAGTTCCCCCGGCGACTCATGCTCTGTTCGATCCGGTAACGCCATAGCCG 653 Query 39382 CTGCCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCG 39422 ||| ||||||| | | ||| || || || |||||||||||| Sbjct 652 CTG-CCGGAACAGGCGGCTGGTGTACTGGCTGCCCTGATCG 613 >seq62 Length=1393 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 24835 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAA 24886 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 25 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTCAA 76 >seq501 Length=12468 Score = 80.6 bits (88), Expect = 7e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 24959 ATCGAGTCTATTTGCCGTGCATGTTCGGTAAGGTGATTAGGTGCGAGGTGAGCATATCGA 25018 || ||||| ||||| ||||| || || || | || |||||||| ||||||||||||||| Sbjct 10943 ATTGAGTCAATTTGACGTGCGTGCTCAGTTAAATGGTTAGGTGCCAGGTGAGCATATCGA 10884 Query 25019 CGAACCATTTCGAT 25032 || ||||||||||| Sbjct 10883 CGGACCATTTCGAT 10870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132553953596438