Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq23193 114 9e-21 seq172 91.5 1e-13 >seq23193 Length=648 Score = 114 bits (126), Expect = 9e-21 Identities = 135/180 (75%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 95166 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95225 ||| | ||||| ||||| ||||| |||| || ||||| || || ||||| ||||| || Sbjct 549 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAG 490 Query 95226 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCG 95283 || | || || ||||| || ||||||||||||||||| ||| | || ||| | ||| Sbjct 489 GATCAAGTGGATCCCGGCGGCCCGCGCCTTCTGGGCGATACGGGCGATCAGTT--CTTCG 432 Query 95284 ACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 95343 | | |||||| | || |||||| | ||| || | |||||||||||| ||||||||| Sbjct 431 A---CCTTCTTGCCGACGATCATCATCATGTCGGCAAATTCGTCGACCACCACCACGATG 375 >seq172 Length=279309 Score = 91.5 bits (100), Expect = 1e-13 Identities = 192/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 95367 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 95423 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 83261 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 83317 Query 95424 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 95483 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 83318 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 83377 Query 95484 GATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCG 95543 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 83378 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 83437 Query 95544 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCC 95603 || || | ||||| |||| || | | ||| | ||||||| ||| || || Sbjct 83438 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 83497 Query 95604 CGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAG 95648 ||| ||||||| || || |||||||| || ||||| || ||||| Sbjct 83498 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTTCGCCAG 83542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346306423855926