Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq3869 161 1e-34 >seq3869 Length=8584 Score = 161 bits (178), Expect = 1e-34 Identities = 284/407 (70%), Gaps = 10/407 (2%) Strand=Plus/Minus Query 15050 CTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGTT 15109 || ||||| || |||||| | ||||| ||||| || |||||||||||||| || ||||| Sbjct 4763 CTGCCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTG 4704 Query 15110 CTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGAC 15169 |||||| | ||||||| ||||||||||||||||| ||| ||| | || || | Sbjct 4703 CTGATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTGAAA 4644 Query 15170 TATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAGT 15229 || || | |||| || |||||||| | ||| || ||||||| | ||||| Sbjct 4643 TACGTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCATTCGCGCGCTGGGCAGC 4584 Query 15230 CCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTG-GTTCCATTCATCAAATAT---CT 15285 || ||||| ||||| || ||||||| || ||| |||| ||| ||| || | Sbjct 4583 CCGATCCGCGGCGGCGAAGCCTTCCACACCGG-CTGCATTCCGTTCTACAAGCATTTCCA 4525 Query 15286 GACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTA-CAGCTT 15344 ||||| || |||| || ||||| |||||||| | ||||| || || || | | ||| Sbjct 4524 GACCGCGG---TGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTCTT 4468 Query 15345 ATATCCCGCTGTGGCATTACCAGTTCGACGATGTCGTTGTGTTGAAGAACAACCGTGGTA 15404 || ||| |||||||| | | || | | ||| |||| ||||||||||||| Sbjct 4467 CTA-CCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGTA 4409 Query 15405 CGGAAGAAAACCGCGAGCGCCGTATCGACTATGGTATTCAGATCAAC 15451 | || | ||||||| || | || ||||| || | ||||||||| Sbjct 4408 CCGACGCCAACCGCGTTCGTCACATGGACTACGGGGTACAGATCAAC 4362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511662602524920