Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1351 141 6e-29 seq4240 131 1e-25 seq3382 125 5e-24 seq8653 114 8e-21 seq3381 111 1e-19 seq13839 89.7 3e-13 >seq1351 Length=12664 Score = 141 bits (156), Expect = 6e-29 Identities = 161/217 (74%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| |||||| |||||||| ||||| ||| |||| |||| Sbjct 4687 AGAACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCC 4628 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| ||||||| ||||||||||| | || | ||||||||||| Sbjct 4627 TCAAGTTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCC 4568 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| |||| | ||| || ||||||| || | ||| | Sbjct 4567 TGGATCTTGNNCTTGACGTTCTCGATGGTGTCGGATC-----CCTCGACCTCGAGGGTGA 4513 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || ||||||||||| || ||||||||||| Sbjct 4512 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4476 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| |||| ||||| |||| |||||| |||||||||||||| || |||| || Sbjct 5146 CTCAATACCAAGTGAAGGGTGGACTCCTTTTGAATGTTATAGTCGCCAAGAGTGCGACCA 5087 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||| ||||| ||||| || || |||||||| | || | ||||||||| Sbjct 5086 TCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTG 5027 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || |||||| | || | ||| | |||| || |||| || ||| Sbjct 5026 TCTTGAATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGCCCTCAACCTCAAGTGTGATG 4967 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||||||||| || ||||||||||| Sbjct 4966 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4932 Score = 122 bits (134), Expect = 6e-23 Identities = 157/217 (72%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| |||||| |||||||| ||||| ||| |||| |||| Sbjct 4915 AGCACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCC 4856 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 4855 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCT 4796 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| |||| | ||| || ||||||| || | || | Sbjct 4795 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGATC-----CCTCGACCTCCAGAGTGA 4741 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| || || ||||| |||||||| ||||| Sbjct 4740 TGGTCTTTCCAGTTAGAGTCTTCACAAAGATTTGCAT 4704 >seq4240 Length=2116 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| |||||||||||| || ||||| || || |||| | || Sbjct 1654 AGCACCAAGTGAAGGGTGGACTCCTTCTGAATATTGTAGTCAGAGAGAGTGCGACCGTCC 1595 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 1594 TCGAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCC 1535 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | | ||||| |||| ||| |||||| Sbjct 1534 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGCCTTCGACCTCAAGGGTGATGGTC 1475 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | ||||| || ||||||||||| Sbjct 1474 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 1443 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| || ||| | || |||| |||| ||||||||||| || Sbjct 1406 CTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCGGCAAA 1347 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||||||||| | || | ||||||||||| | || || |||||| Sbjct 1346 GATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1287 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||||||| |||| ||| || ||||| || ||||| || ||||| Sbjct 1286 CTCGATGGTGTCCGAGCCCTCGACCTCAAGGGTAATAGTCTTACCAGTGAGTGTTTTTAC 1227 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 1226 GAAAATCTGCAT 1215 >seq3382 Length=4522 Score = 125 bits (138), Expect = 5e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| || ||| | || |||| |||| ||||||||||| || Sbjct 4372 CTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCGGCAAA 4313 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||||||||| | || | ||||||||||| | || || |||||| Sbjct 4312 GATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 4253 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || ||||||| || | ||| |||||||| || ||||||||||| || Sbjct 4252 TTCAATGGTGTCGGATCCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 4193 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 4192 GAAGATCTGCAT 4181 Score = 122 bits (134), Expect = 6e-23 Identities = 159/220 (72%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| |||||| || ||||| ||||| || ||| | || | || Sbjct 4164 AGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCC 4105 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 4104 TCCAACTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCT 4045 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| |||| ||||| | |||| || |||| ||| | Sbjct 4044 TGGATCTTGGCCTTGACGTTCTCGATGGTATCGGAAC-----CCTCAACCTCAAGGGTGA 3990 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||||||||| || || ||||| || || || |||||||| Sbjct 3989 TGGTCTTTCCGGTCAGAGTCTTGACGAAAATTTGCATGAT 3950 >seq8653 Length=1535 Score = 114 bits (126), Expect = 8e-21 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGT--C 34806 ||||||| | | | ||| |||| ||| | ||| ||||||||||||||| |||| | Sbjct 192 TTCCTCCACGGAGACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGC 251 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 ||| || |||| | || || |||||||| ||||| ||||||| ||||| || || | Sbjct 252 CGAGAG--TGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGTTGATCGGG 309 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | || || ||||| | || ||| |||||| | || | ||| | |||| Sbjct 310 TGGGATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTCTCGATAGTGTCAGAGCCCTC 369 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| || | || ||||||||||| || | |||||||||||||| ||||| || Sbjct 370 GACCTCTAGTGTGATGGTCTTTCCAGTCAATGTCTTTACAAAGATTTGCATTAT 423 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| ||| | || |||| || || ||||| ||||| || Sbjct 1 CTCCTTCTGAATGTTGTAGTCACCGAGGGTACGACCATCCTCGAGCTGCTTGCCGGCAAA 60 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||| || | || | |||||||| || | || || |||||| Sbjct 61 GATGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTATCTTGGATCTTGGCCTTGACGTT 120 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | |||| || || | ||| || ||||| || ||||| ||||| || Sbjct 121 CTCGATAGTGTCAGAGCCCTCAACCTCGAGGGTGATAGTCTTGCCAGTGAGAGTCTTCAC 180 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 181 AAAGATCTGCAT 192 >seq3381 Length=12314 Score = 111 bits (122), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||| ||||| |||| ||| ||||| ||||| ||||| ||| | || || Sbjct 1173 CTAAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACCGAGGGTACGACCA 1114 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| ||||||||| || || || || || |||||||| | || | || |||||| Sbjct 1113 TCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCGGGTGGAATACCTTCCTTG 1054 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTA 34940 || | || || ||||| || || || | || | |||| || |||| || | Sbjct 1053 TCTTGAATCTTAGCCTTGAC--ATTCTCAATGGTGTCCGAGCCCTCAACCTCAAGAGTGA 996 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| || ||||| ||||| |||||||||||||| Sbjct 995 TCGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 959 >seq13839 Length=228 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| |||||| |||||||| ||||| ||| |||| |||| Sbjct 141 AGCACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCC 82 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 81 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325580756282513