Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_022772.1 Length=156338 Score E Sequences producing significant alignments: (Bits) Value seq3869 96.9 3e-15 >seq3869 Length=8584 Score = 96.9 bits (106), Expect = 3e-15 Identities = 284/432 (66%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 104945 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 105004 || || || || |||||||||||||| |||||||||||||| || ||||| || || || Sbjct 4763 CTGCCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTG 4704 Query 105005 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 105064 || ||| | ||| |||| |||| || ||||| || || ||| ||||| | Sbjct 4703 CTGATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTGAAA 4644 Query 105065 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGC 105124 || || ||| | ||||| || ||||| | | | ||| ||||| | | || ||| Sbjct 4643 TACGTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCATTCGCGCGCTGGGCAGC 4584 Query 105125 CCTATCCGAAAAGGTGAAATGGTGCACACAGGTCTG-GTTCCTTTC-ATAA--AATATCT 105180 || ||||| || ||| | ||||| || ||| |||| ||| | || | | | Sbjct 4583 CCGATCCGCGGCGGCGAAGCCTTCCACACCGG-CTGCATTCCGTTCTACAAGCATTTCCA 4525 Query 105181 GACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAACTTGCTA 105240 ||| | || | || || ||||| || ||||| | || ||||| | ||||| || Sbjct 4524 GACCGCGG---TGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTCTT 4468 Query 105241 TATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCT 105300 ||| || |||||| || | || | |||| ||||| |||||||||||| Sbjct 4467 CTACCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGTAC 4408 Query 105301 TGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTCGA 105360 || | ||||| | || | || ||||| || | ||||||||| | |||| | Sbjct 4407 CGACGCCAACCGCGTTCGTCACATGGACTACGGGGTACAGATCAACAAGCTGATGTACAC 4348 Query 105361 ACGTCTGGTGAA 105372 |||||| |||| Sbjct 4347 CCGTCTGCTGAA 4336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499977127054160