Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq19823 120 1e-22 >seq19823 Length=496 Score = 120 bits (132), Expect = 1e-22 Identities = 338/511 (66%), Gaps = 26/511 (5%) Strand=Plus/Minus Query 56375 GAGTTCGACCGCTACCTCGTCGAGCTGCGGTGGGCGCAGCGGTTCGCG-TACTACAACCG 56433 |||||| ||||||| || |||||||||||||| |||| |||||| | || ||||| Sbjct 493 GAGTTCACCCGCTACATCCGGGAGCTGCGGTGGGCCCAGCACTTCGCGCTGCTG-AACCG 435 Query 56434 CGCCGAGATGATGGACCGTTTCGCG-CAGGCGTTCCGGCATTGGATCGGCGC----CGAC 56488 | ||||||||||| ||||| || ||||||| | |||| | || Sbjct 434 GGAGGAGATGATGGA-----TCGCGTCA-----TCCGGCAGGTG-TCGGAGTTCCTCGGA 386 Query 56489 GCCCCGATCGACGAGCTGGTCGTCGAGACGATCAACACGCATCACAACTACACGCAGAAG 56548 ||||| ||||||| | || || |||||| || ||||||| ||| || | Sbjct 385 ACCCCGGTCGACGAACAGG------AGCGCATCAACTGCCACCACAACTTCACCGAGTCG 332 Query 56549 GAGCTGCACGGCGGCCGTGAGGTGTGGTTGACCCGCAAGGGTGCGATCGACGCGCACGAG 56608 ||| |||| ||| |||||||| || | || ||||| || ||| | ||| ||| Sbjct 331 GAGAAGCACTACGGGAAGCAGGTGTGGGTGTCACGGAAGGGAGCCATCCAGGCGGACGCC 272 Query 56609 GGTGTGCGGGGCCTGATTCCCGGCAGCATGGGCACTTGCTCGTATGTCGTG-ACGGGCAA 56667 ||| | |||||| || ||||| ||||| || ||| || || ||| | |||| Sbjct 271 GGTCGACCGGGCCTCATCCCCGGGTCGATGGGGACCGCCTCTTACGTGGTGGAAGGGCTC 212 Query 56668 GGGCAATCCCGAGGCGCTGCATTCTGCGCCGCACGGCGCCGGTCGCCGGTTCTCGCGCGC 56727 || | | || || ||||| | || | |||||||| ||||| || || ||| ||| | Sbjct 211 GG-CGACCCGCAGTCGCTGAACTCCTCCCCGCACGGTGCCGGACGGGAGTACTCCCGCTC 153 Query 56728 CAAGGCCCGAAAGCTGTTCACGGTCGACGACCTCGCCGACCGTATGCAGGGCATCGAGTA 56787 ||| || | |||||| |||| | || || ||| ||||||||||| Sbjct 152 GGCGGCGCGGCGGACCTTCACGCACGACCAGCTGCGAGAGGCGATGACGGGCATCGAGTT 93 Query 56788 CCGGCACGGCGAGGCGTGGGTCGATGAGATTCCCGACGCCTACAAGCCGATTGACGTCGT 56847 ||| || ||| || | |||| ||||| || | || ||||||||||| ||| || Sbjct 92 CCGTGACACCGATGCCTTCATCGACGAGATCCCGCAGGCGTACAAGCCGATCGACCAGGT 33 Query 56848 GATGGCCGACGCCGACAGCCTGGTGACGATC 56878 |||||| || |||| | | || || ||||| Sbjct 32 GATGGCGGATGCCGCCGGACTCGTATCGATC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199697677049769