Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq23193 114 9e-21 seq172 96.9 2e-15 seq5405 82.4 5e-11 >seq23193 Length=648 Score = 114 bits (126), Expect = 9e-21 Identities = 135/180 (75%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 97125 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97184 ||| | ||||| ||||| ||||| |||| || ||||| || || ||||| ||||| || Sbjct 549 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAG 490 Query 97185 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCG 97242 || | || || ||||| || ||||||||||||||||| ||| | || ||| | ||| Sbjct 489 GATCAAGTGGATCCCGGCGGCCCGCGCCTTCTGGGCGATACGGGCGATCAGTT--CTTCG 432 Query 97243 ACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 97302 | | |||||| | || |||||| | ||| || | |||||||||||| ||||||||| Sbjct 431 A---CCTTCTTGCCGACGATCATCATCATGTCGGCAAATTCGTCGACCACCACCACGATG 375 >seq172 Length=279309 Score = 96.9 bits (106), Expect = 2e-15 Identities = 193/285 (68%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 97326 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 97382 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 83261 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 83317 Query 97383 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 97442 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 83318 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 83377 Query 97443 GATACCGTTGTACGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGACCCG 97502 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 83378 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 83437 Query 97503 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACC 97562 || || | ||||| |||| || | | ||| | ||||||| ||| ||||| Sbjct 83438 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 83497 Query 97563 TGATCCGGTGGCGCCAGCCACCAGCAGGTGCGGCATTTTGGCCAG 97607 || ||||||| || || |||||||| |||||||| || ||||| Sbjct 83498 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTTCGCCAG 83542 >seq5405 Length=592 Score = 82.4 bits (90), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 99884 GTTC-AGGTAGTAGGGCTTGTCGAGCATGATCGGGTCGACCTCCCCGGCCGGCACGAACT 99942 |||| |||||||| ||||||||||| ||| | ||||||||| | ||| |||||||||| Sbjct 374 GTTCGAGGTAGTACGGCTTGTCGAGGGTGAGCAGGTCGACCTGCTCGGAGGGCACGAACT 433 Query 99943 CTACGACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCTGCCAAGTCCTCATTGGTCA 100002 | |||||||| ||| || | | | || ||| || | || | ||| || || |||| Sbjct 434 CGACGACGTCGATCTCCCGGCTCTTCTCCGCGGGGAGGGCGGCGAGGTCGTCCTTCGTCA 493 Query 100003 GTAGGGCGGTTTGCCCGTCG 100022 | | | |||| || || ||| Sbjct 494 GCACGACGGTCTGGCCTTCG 513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353574322717910