Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq19823 111 6e-20 >seq19823 Length=496 Score = 111 bits (122), Expect = 6e-20 Identities = 227/335 (68%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 54700 CATCAACGCGCACCACAACTACACGCAGAAGGAGCGGCACGGCGACCGTGACGTGTGGCT 54759 ||||||| |||||||||| ||| || |||| |||| || | |||||| | Sbjct 362 CATCAACTGCCACCACAACTTCACCGAGTCGGAGAAGCACTACGGGAAGCAGGTGTGGGT 303 Query 54760 GACCCGTAAGGGTGCGATCGACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTCGAT 54819 | | || ||||| || ||| | ||| ||| ||| | |||||| || || || ||||| Sbjct 302 GTCACGGAAGGGAGCCATCCAGGCGGACGCCGGTCGACCGGGCCTCATCCCCGGGTCGAT 243 Query 54820 GGGCACCTGTTCGTATGTCGTGACCGGCAAGGGCAATCCCGAGGCGTTGTGCTCGGCGCC 54879 ||| ||| || || || ||| || ||| | || || || || ||| | || Sbjct 242 GGGGACCGCCTCTTACGTGGTGGAAGGGCTCGGCGACCCGCAGTCGCTGAACTCCTCCCC 183 Query 54880 GCATGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTGTTCACGGTCGACGA 54939 ||| ||||| || || || ||| ||| || |||||| | |||||| |||| | Sbjct 182 GCACGGTGCCGGACGGGAGTACTCCCGCTCGGCGGCGCGGCGGACCTTCACGCACGACCA 123 Query 54940 CCT-CGAAGCGCGTATGACGGGCATCGAGTACCGCAAGGGCGAGGCGTGGGTCGACGAGA 54998 || ||| ||| |||||||||||||||| ||| | ||| || | ||||||||| Sbjct 122 GCTGCGAGAGGCG-ATGACGGGCATCGAGTTCCGTGACACCGATGCCTTCATCGACGAGA 64 Query 54999 TTCCCGACGCATACAAGCCGATCGACGTCGTGATG 55033 | || | || ||||||||||||||| |||||| Sbjct 63 TCCCGCAGGCGTACAAGCCGATCGACCAGGTGATG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190764835021116