Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq2516 208 8e-49 seq2261 131 2e-25 >seq2516 Length=21774 Score = 208 bits (230), Expect = 8e-49 Identities = 159/187 (85%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 || ||||| ||||||||||||||||| |||||||| ||||| ||| || || ||| || Sbjct 1782 GGCGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACCCTGCTGGACGCGGTTGAG 1841 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541 ||||||||||||||||| ||||||||||| ||||| ||||| || || || ||||| ||| Sbjct 1842 CATCCGGAAAAATATCCGCAGCTGACCATTCGTGTTTCCGGCTACGCGGTACGCTTCAAC 1901 Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAA 108601 |||||||| || ||||||||||||||||| ||||| ||||||||||| || || || ||| Sbjct 1902 TCTCTGACGCCGGAACAGCAGCGCGACGTAATCGCCCGTACCTTTACCGAAAGCCTGTAA 1961 Query 108602 TGGCTAA 108608 |||||| Sbjct 1962 -GGCTAA 1967 >seq2261 Length=3986 Score = 131 bits (144), Expect = 2e-25 Identities = 132/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||||||| ||||||||||| ||||| || || |||| ||| || || | | Sbjct 508 GGTGGTCAGCACCTGAACGTGAACGTCATGAACCGCGAAATGCTGCTCGACGCGATGGAA 567 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541 | |||||||||||||| |||||||||||||||||||| || || || || || |||||| Sbjct 568 AACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGTTTTAAC 627 Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGA 108593 || ||||| ||||||||||| || ||||| | |||||||| ||| ||| Sbjct 628 TCCCTGACCAAAGAACAGCAGCAGGATGTTATTACCCGTACCTTCACTCAGA 679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540954663539360