Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq360 178 3e-40 seq4750 131 4e-26 seq97 89.7 1e-13 >seq360 Length=29890 Score = 178 bits (196), Expect = 3e-40 Identities = 217/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| |||||||||||||| | | ||| | || || || || || || Sbjct 27583 ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGGCAGGACCCGGAA 27524 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || ||||| | ||||| |||||||| || || ||| |||| | ||||| || || Sbjct 27523 GTACGCTACATGCCAAGTGGCGGCGCTGTCGCCAACTTCACGCTGGCAACTTCCGAATCC 27464 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || ||||| ||||| | |||||| | || ||||||||||| ||| || Sbjct 27463 TGGCGTGACAAGCAGACCGGCGAAATGAAAGAGCAGACCGAGTGGCACCGCGTTGTGCTG 27404 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 || || || ||||| ||||| ||||| || || || || ||||| ||||| || || ||| Sbjct 27403 TTCGGCAAACTGGCGGAAGTCGCTGGTGAGTATCTGCGTAAAGGCTCTCAGGTGTACATT 27344 Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 ||||||||||| || |||||| |||||| |||||||||| |||||| Sbjct 27343 GAAGGCCAGCTGCGTACCCGCAAGTGGACCGATCAATCCGGTCAGGACAAATACAC 27288 >seq4750 Length=4641 Score = 131 bits (144), Expect = 4e-26 Identities = 178/246 (72%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 38206 GGTGTAAACAAGGTGATCTTAATTGGTCACCT-TGGTCAAGATCCAGAGGTGCGCTATCT 38264 || ||||| || |||||||| |||| ||||| ||||||||||||||| ||||| | Sbjct 3986 GGCGTAAATAAAGTGATCTTGGTTGG-CACCTGTGGTCAAGATCCAGAAACTCGCTACTT 4044 Query 38265 ACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTTTGGCGGGATAA 38324 ||| | ||| ||||| | || ||| | ||||| |||| ||| || || Sbjct 4045 ACCGAACGGTAATGCAGTAACCAATCTCAGCCTTGCAACAAGTGAGCAGTGGACTGACAA 4104 Query 38325 GCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGGAAGCT 38384 |||||| |||||| | || || || || |||||||| ||| ||||||||||||| | Sbjct 4105 GCAAACGGGACAGAAAGTCGAAAAGACCGAATGGCACCGTGTTTCTTTGTTTGGGAAAGT 4164 Query 38385 GGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGCCAGCT 38444 |||||| | ||||| || || || || |||||||| || || || || ||||| |||| Sbjct 4165 CGCTGAAATCGCTGGTGAGTATCTGCGGAAAGGATCGCAGGTATACATCGAAGGTAAGCT 4224 Query 38445 TGAAAC 38450 | |||| Sbjct 4225 TCAAAC 4230 >seq97 Length=44549 Score = 89.7 bits (98), Expect = 1e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 38212 AACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAGGTGCGCTATCTACCAAGC 38271 |||||||| || | | || | ||| || ||||||| || || || || | || | | Sbjct 4722 AACAAGGTCATTCTCGTAGGACGCCTGGGAAAAGATCCGGAAGTCCGTTACATCCCCAAC 4781 Query 38272 GGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTTTGGCGGGATAAGCAAACC 38331 || ||||||||||||||| | | || ||||| || ||||| || || || || Sbjct 4782 GGGGGCGCAGTGGCAAACCTGCAGGTCGCCACGTCGGAAACCTGGCGTGACAAACAGACA 4841 Query 38332 GGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGGAAGCTGGCTGAA 38391 || || ||| | ||||| ||||| || || |||| || ||||| || ||| Sbjct 4842 GGGGAGATGCGGGAGCAGACAGAATGGCATCGCGTGGTGCTGTTCGGCAAGCTCGCGGAA 4901 Query 38392 GTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGCCAGCTT 38445 || ||||||||||| || || || || | || || || || ||||| |||||| Sbjct 4902 GTGGCTGGCGAATATCTGCGCAAGGGCGCGCAGGTCTACATCGAAGGTCAGCTT 4955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132854652769594