Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_024783.1 Length=44332 Score E Sequences producing significant alignments: (Bits) Value seq373 80.6 8e-11 >seq373 Length=63667 Score = 80.6 bits (88), Expect = 8e-11 Identities = 124/174 (71%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 18239 ATATTCCGGGGACTGGGACGGCACGTTTAAACGCGCATGGACGGATAACCCTGCGTGGCA 18298 |||| |||| | |||| |||| ||||||| | || |||||||||||||| || ||| Sbjct 29648 ATATACCGGCGTCTGGACCGGCGGGTTTAAATGGGCCTGGACGGATAACCCGGCCTGGAT 29707 Query 18299 CTGGTACGATATTTGTATTACTGAGCGCTTCGGCCTCGGTCGGCGTATCA-AACCGCAAA 18357 || ||||| ||| || |||| || || || |||||| ||| | | | ||| || Sbjct 29708 CTATTACGACATTGTTACAGCTGACCGTTTTGGTCTCGGTAATCGTCTGAGCAGCGCCAA 29767 Query 18358 TGTT--AAACCGGTACGCGCTCTACCAGATTGCGCAGCGCTGCGATCAGTTGGT 18409 | || || || |||| ||||||||||| ||| |||||||||| |||| Sbjct 29768 TATTTCGAAATGG---ACGCTGTACCAGATTGCACAGTACTGCGATCAGCTGGT 29818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141693289103956