Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3381 98.7 7e-16 seq8653 91.5 1e-13 seq6863 91.5 1e-13 seq3382 87.8 1e-12 >seq3381 Length=12314 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| |||||| || |||||||| || ||| || || | || ||| Sbjct 1167 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACCGAGGGTACGACCATCTTCC 1108 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 ||||| ||||| |||||||| | ||||||||| || | || | |||||| ||||| | Sbjct 1107 AATTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCGGGTGGAATACCTTCCTTGTCTTGA 1048 Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || | ||| ||| |||||| || || |||| |||||||| || Sbjct 1047 ATCTTAGCCTTGA-CATTCTCAATGGTGTCCGAGCCCTCAACCTCAAGAGTGATCGTCTT 989 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || ||||||||||||||| Sbjct 988 GCCAGTGAGAGTCTTGACAAAGATCTGCATA 958 >seq8653 Length=1535 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || || ||| || || |||||||| ||| ||| ||||| | Sbjct 205 ACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGCCGAGAGTGCGACC 264 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | ||| || |||||||| |||||||| || ||||| | || | ||||||||| Sbjct 265 GTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGTTGATCGGGTGGGATACCTTCTTT 324 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || || | || | || | ||||| || || || | |||| Sbjct 325 GTCTTGAATCTT-TGCCTTGACGTTCTCGATAGTGTCAGAGCCCTCGACCTCTAGTGTGA 383 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || ||||||||||| ||||| Sbjct 384 TGGTCTTTCCAGTCAATGTCTTTACAAAGATTTGCAT 420 >seq6863 Length=4430 Score = 91.5 bits (100), Expect = 1e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGT-GCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||||||| |||| ||| ||||| | || | || || |||||||||||| Sbjct 1325 CCACCTCTCAAACGTAGAACCAGATGAAGAGTCGATC-CCTTCTGGATGTTGTAATCGTC 1383 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| || || |||| |||||||| ||||| |||| | || ||||| || || Sbjct 1384 CATTGTGCGATCATCCTCCAGCTGTTTTCCAGCAAAGATCAGTCTTTGTTGATCCTGTGG 1443 Query 33642 CACACCTTC 33650 | |||||| Sbjct 1444 GATACCTTC 1452 >seq3382 Length=4522 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || ||| ||| ||||| |||||||| || ||||| || || | Sbjct 4168 ACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGACC 4109 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| ||||| || ||||||||||| || | ||||||||| || | || | || || || Sbjct 4108 GTCCTCCAACTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTT 4049 Query 33654 GTC 33656 ||| Sbjct 4048 GTC 4046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328590920379840