Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq3869 159 4e-34 seq2516 158 1e-33 >seq3869 Length=8584 Score = 159 bits (176), Expect = 4e-34 Identities = 289/421 (69%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 135351 CATCAGGTTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCC 135410 |||||| || || |||||||| |||||||| | || |||| |||||| | || || Sbjct 4353 CATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACC 4412 Query 135411 CTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAG 135470 ||||| || | ||| | ||| ||||| | || | ||||||||||||||| |||| Sbjct 4413 ACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAG 4472 Query 135471 AGTCGCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATG 135530 || ||||| ||||| || | ||||| || ||||| || || || || ||||| ||||| Sbjct 4473 GGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATG 4532 Query 135531 TTTCCAGAATGGGATAACGCCAGTATGACGAA--CTTCACCATGCCCGATCTTAGATCCT 135588 || |||| || || ||| || || ||| |||| || | |||| || Sbjct 4533 CTTGTAGAACGGAATGCAGCCGGTGTG--GAAGGCTTCGCCGCCGCGGATCGGGCTGCCC 4590 Query 135589 TCCGCGCGAATCATGCCAGCGTTGATACCGATACCCGCACGCTTGCTAATATACTTGATG 135648 ||||||||| || |||||||| ||||| || || |||| | || || || | Sbjct 4591 AGCGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACA 4650 Query 135649 ATTGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACAC 135708 || || | | || |||||||| | || ||| | | || |||| ||| || Sbjct 4651 ATCGCGCTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAG 4710 Query 135709 GAACTAAATTGGCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCAGAGAGATT 135768 || || || || || |||||||||||||| || | ||| ||||| || ||||| |||||| Sbjct 4711 GAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAGCGAGATT 4770 Query 135769 T 135769 | Sbjct 4771 T 4771 >seq2516 Length=21774 Score = 158 bits (174), Expect = 1e-33 Identities = 141/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 53990 TTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCG 54049 ||||||||||||||| ||||| ||||| |||||||| || || |||||| |||||||| Sbjct 1952 TTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGAGTTGAAGCG 1893 Query 54050 CACTGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGC 54109 || ||||| || ||||| ||||| || |||||||| || || || ||||| ||||| || Sbjct 1892 TACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGC 1833 Query 54110 GTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCACCTTCGAC 54166 |||||||| |||| || || |||||||| |||| ||||| || |||||||| Sbjct 1832 GTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTCGAC 1776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522644326393280