Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq2516 208 8e-49 seq2261 127 2e-24 >seq2516 Length=21774 Score = 208 bits (230), Expect = 8e-49 Identities = 161/190 (85%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 62322 TTAGCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAG 62381 |||||| ||| || || || ||||||||||| ||||| ||||| |||||||||||||| | Sbjct 1967 TTAGCC-TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCG 1909 Query 62382 TCAGAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAACTGCGGATATTTTT 62441 |||||||||| ||||| || || || ||||| ||||| ||||||| |||||||||||||| Sbjct 1908 TCAGAGAGTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTT 1849 Query 62442 CTGGATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTT 62501 | ||||||| ||| || || ||| ||||| |||||||| ||||||||||||||||| | Sbjct 1848 CCGGATGCTCAACCGCGTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCT 1789 Query 62502 GACCACCTTC 62511 |||| ||||| Sbjct 1788 GACCGCCTTC 1779 >seq2261 Length=3986 Score = 127 bits (140), Expect = 2e-24 Identities = 135/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 62337 TCTCAGTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCAGAGAGTTAAAGC 62396 ||| ||| |||||||| | ||||| || |||||||||| ||||| |||||||| | Sbjct 679 TCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGGAGTTAAAAC 620 Query 62397 GAACTGCATAACCGGATACACGGATGGTCAACTGCGGATATTTTTCTGGATGCTTAACTG 62456 | || || || || |||||||||||||||| ||||||||||||||| || | | | | Sbjct 619 GTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCATCG 560 Query 62457 CATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 62514 | || ||| |||| || || ||||| ||||||||||| ||||||||||| || Sbjct 559 CGTCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCACCTTCGAT 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540679560640240