Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_026601.1 Length=37238 Score E Sequences producing significant alignments: (Bits) Value seq3931 562 7e-156 seq17194 203 8e-48 seq8746 125 2e-24 seq3518 114 3e-21 seq23684 107 5e-19 >seq3931 Length=1953 Score = 562 bits (622), Expect = 7e-156 Identities = 1127/1642 (69%), Gaps = 49/1642 (3%) Strand=Plus/Plus Query 210 ATCCAGCGGCCTGCCCATACCACGCGACCAATGATGTCGATTGCCTCTAGGTCTTGCTTG 269 ||||| | ||| |||||||| ||||| ||||| || || | | | | | | | || Sbjct 56 ATCCAACCGCCAGCCCATACTACGCGGCCAATTATCTCCAGGTCGTTCAACTTATCCCTG 115 Query 270 G--ACACGTACATCGTCTGGTAGGCCGAATTAGCGCTAATGATCGC--TAGACCGCCATT 325 | ||| | |||| |||||||| || | || ||||| |||||| | | Sbjct 116 GGGACAACCATATCGC--GGTAGGCCTTGTTCTCACTGATGATGTGAATAGACC--CGTC 171 Query 326 GATTTGCCGCTGGATTCGCTTGGCGTATAGGTGGTCATCCAACCGAATGACGTAGATAGC 385 || |||||||||| | || || || || |||||||||| ||| |||||||| | ||| Sbjct 172 GAACTGCCGCTGGAGCCTTTTCGCATAGAGATGGTCATCCAGCCGGATGACGTATACAGC 231 Query 386 CTCGTCGCGGACCTCGCCGCAGCTGTGGTCAATCATCACCGTATCACCATCGCTCAACAG 445 ||| | | | || || |||||||||||||||||| ||||| |||||||| | || Sbjct 232 CTCTCCCTCAAGCGAGCTGCGGCTGTGGTCAATCATCACAGTATCGCCATCGCTTAGAAG 291 Query 446 CGGCTCCATTGAGTCACCGCCGATGCGAACGGCTGACATATTCGCTATCTCCAGACCTTG 505 |||||| || || ||| | | || | || |||| ||| ||||| ||||| Sbjct 292 TCCCTCCATCGAATCCCCGTCCACTCGGATTGCGGACAGTCGCGCAGAGTCCAGGCCTTG 351 Query 506 CTTCCGCAAGC-TGTA-GCGAGTGAACGCCAGCTTGGCCAAGGTCCG-CGCGCCCTCCAT 562 ||| || |||| ||| ||| |||||||| ||| ||| ||| | | || || || | Sbjct 352 CTTGCG-AAGCGAGTACGCG-GTGAACGCAAGC-TGGGTTAGGACAGTAGCCCCTTCGCT 408 Query 563 CCAGGAACCGTGGCCAGCACTCACCCGCGCGTCGTAGAGGGGTACGTAGGCGTAGGTGTC 622 ||||| ||||| || ||||| | |||||||| | || ||||| ||||| |||| Sbjct 409 CCAGGCGCCGTGTCCCGCACTACAGTGGGCGTCGTACAAAGGCACGTAAGCGTACTTGTC 468 Query 623 ATCCTCTGCGGCTTCATCCGGG--GCAGCGCTGTGCA---TTTCCCCCTCCCCGGTAGCT 677 ||| | || | ||| ||||| | | || | |||||||| || | ||| Sbjct 469 CTCCGCAATGG-----ACTGGGAAGCAGCTCCCTTCAACTTGTCCCCCTCGCCTGAAGCA 523 Query 678 AGCCAGCCAATGTCCACCCCCGCAGCCTTTGCAATGTCCACACACCGCGCAAGCTTGGGT 737 |||||||||||||| || || | ||||| || ||||| ||||||||||| | |||||| Sbjct 524 AGCCAGCCAATGTCGACGCCGACCGCCTTAGCGATGTCTACACACCGCGCTACCTTGGGC 583 Query 738 TCACTGTCGCCGGTCAAGTAGTACTCCAGGGTACGCCTAGGGATAGCGGTTAGTCGCGCG 797 ||||| | ||||||| ||| ||||| ||||| || | ||||||||||| |||||||| Sbjct 584 TCACTCTGCCCGGTCAGGTAATACTCAAGGGTGCGTCGTGGGATAGCGGTAAGTCGCGCC 643 Query 798 AGTTCATCGCCACTTCCAACCAAGGCGGCGCAGGTTCTAATCCGAGCAGCCAGACCTTCG 857 | |||||||||||||| | | | ||||| | || || | ||||| |||||| Sbjct 644 AACTCATCGCCACTTCCCGCTATCTCAGCGCATTGCCGGATACGTTCCGCCAGCCCTTCG 703 Query 858 GTCATTTCGCTTTCCCCTCAGAAGAAAGCGAAA-TGCAGCCAAGAAAAATAGCTAGATTT 916 ||||||||||||| || || | ||||| ||| || | | || ||| | |||| Sbjct 704 CTCATTTCGCTTTCTCCCTTGAGCTATCCGAAACGGCATCCCTGCACAA-AGCGAAATTT 762 Query 917 CGCTTTGTC-AGGAAGCCTTTATATATCAATGACTTAGCCAATTCTCGCCTCTTTATTGA 975 |||||| || | ||||| ||| | ||||| || ||| ||| || | | | Sbjct 763 CGCTTTCTCGATAAAGCC-TTACAGATCAAAGAGATAGACAAAATCAACCACCATCAAGC 821 Query 976 TAAATCTGGCAAGCGAAACGCCATTTTTCGCTTTACCAGTTGGCTGTTAATGGCTATGTT 1035 ||| ||| |||||||| ||||||||||||||||||| | | | | |||||||||| Sbjct 822 CAAAGATGGAAAGCGAAAAGCCATTTTTCGCTTTACCACATAGTTATATTTGGCTATGTT 881 Query 1036 TATGCCCTAAGTCACGTTAGACAACCCAAGTAGTCGCCCTGCATGGCGGCT-GAAATGGA 1094 ||||||||| || |||||||||| ||||| | | |||| || || | |||||| Sbjct 882 TATGCCCTAGGTAACGTTAGACATCCCAAAAAACCACCCTTGCCGGTGGTTATGAATGGA 941 Query 1095 ACGTAGGCATGAACAGAACCGAAATCCCCCGCGACAACAACGTCCGCTGGGAGTGGATCA 1154 |||||||||||| |||||||||||| | ||| | | | || ||||| ||||||| Sbjct 942 CGCTAGGCATGAACAAAACCGAAATCCCGCTTGACCCAACCCTGCGATGGGAATGGATCA 1001 Query 1155 AATACCAGCTCCGTGCCAGGGGGTCGTCCCTGGCTGAGGTGGCCCGCTCCCTCGACGTCT 1214 ||||||| || ||| || | || |||| || || |||| || || ||||| | Sbjct 1002 AATACCAACTTCGTACCCGAGGTACGTCACTCGCAATCTTGGCGCGTGAACTTGACGT-T 1060 Query 1215 CCAG-CCCGGCAGTCAAAAACGCCAAGCTGACTCCCTACCCTCGGGTAGAGCGCGCCATC 1273 ||| | || ||||| ||||| |||| || | || || || | ||||| || || Sbjct 1061 ACAGATGCTGCCGTCAAGAACGCTAAGCGCACCGCATATCCGCGAATGGAGCGAGCTATT 1120 Query 1274 GCTGCTGTACTCGACCTCAGCCCGCTAGTGCTGTGGCCAGAGCGCTGGCTAGACGACGAG 1333 || || || | ||||| || | | ||||||| || || ||| | ||| Sbjct 1121 GCCCGTGCGCTAGGCCTCAAGCCAATCGACTTGTGGCCCGAACGTTGGAACGCAAACGGC 1180 Query 1334 AATCCGAAGCGGCAACGGCCGAATCGCTCGGAGACCTTGCAGGCATATGTCAGACATATG 1393 | || | || ||| | | ||| | || || | ||| | || || | Sbjct 1181 ACCCCACACCGTATTCGGGTGCAGCGCGCAGA-AC--ACAACGCA-ACTTC-----TA-G 1230 Query 1394 CCAGGTGCTGAGGAAAATACCAGATACGCTGACCAAGCGCAGCGTAAAGCCGGCGCGGGG 1453 ||| | || | | |||| | || || || |||||| ||||| ||| | Sbjct 1231 CCAAGAGC------ATAACCCAGCT--TATGCCCTTCGACACCGTAAAACCGGCACGGAG 1282 Query 1454 GCTTGAACATGGCCCGCCGCAAAGACGATCGAACGCTGGACATCTTCGATGTTCCGCAGC 1513 | | |||||| ||| || || ||||| ||| | ||||||||| ||| || |||| Sbjct 1283 GTATAAACATGCGCCGTGTAAAGGATGATCGTACGTTAGACATCTTCTCTGTCCCACAGC 1342 Query 1514 CGGCCCTCGCTATACCTGGTGAGTGCAACTACGCCGCTCAAGTCAGCGAACTGGTCAGCG 1573 | | || ||||| || || | ||||| | ||||| || ||||| |||||| |||||| Sbjct 1343 CAGTTCTGGCTATCCCAGGGAATGGCAACAATGCCGCACAGGTCAGTGAACTGATCAGCG 1402 Query 1574 AAATTCTGAAGGCTTGCGACCTTGACCGTTACGAGGTCGCCGCCCGGATGTCGCGCCTGT 1633 | |||||||| | || ||| || ||||||||||| | | || || ||||| ||| ||| Sbjct 1403 AGATTCTGAAAGGTTCCGATCTGGACCGTTACGAAATTGGTGCACGCATGTCTCGCTTGT 1462 Query 1634 CCGGCGATGACGTGAGCAAGAACATGCTCGACGCCTGGTCGAGTCCCGCCCGAACTGATC 1693 | |||||||||||||| ||| ||||||| ||||| |||||||| || |||||||| || | Sbjct 1463 CTGGCGATGACGTGAGTAAGCACATGCTTGACGCGTGGTCGAGCCCAGCCCGAACAGACC 1522 Query 1694 ACAACTTGCCTTTCTACCGCGCCGCCCTTCTGGAGGACGTCTGCGCGAGCCATCTGCTGA 1753 | ||| |||| ||||| | ||| | || || || || || || || || | | | Sbjct 1523 ATAACCTGCCGTTCTATAGAGCCCCACTGCTTGAAGAAGTTTGTAGCAGTCACGTTTTAA 1582 Query 1754 CCAACTGGCTGGTCGATGTACGTGGCGGCCGCGTGGCTTACGGCCGCGATGCACTGCTCG 1813 || |||||||||| || |||||| ||||||||||||||||| ||||||||||| || Sbjct 1583 CCGACTGGCTGGTTGAGCAACGTGGTGGCCGCGTGGCTTACGGTCGCGATGCACTCAACG 1642 Query 1814 CCGAACTGGGCCGCCTTGAGCG 1835 | || || || || || | ||| Sbjct 1643 CGGAGCTTGGTCGTCTGGCGCG 1664 >seq17194 Length=1719 Score = 203 bits (224), Expect = 8e-48 Identities = 190/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 8010 GAAGTGGTCACCCTGGTAACCAACGCTTTCCGCACTGACACGAAGGGCGAAATCCGTACC 8069 ||||||||||| ||||||| | || ||||| |||||| || ||||| ||||| || Sbjct 1719 GAAGTGGTCACGCTGGTAAATGATGCCTTCCGGACTGACCAAAAAGGCGACATCCGCACA 1660 Query 8070 GCCCGAGTGCTCGCCCTGCGCCGCCTGGACATCCAAGACGAGCGCTGGCTGCGAGCCATG 8129 ||||| || || || ||||||| |||| || || || ||||||| ||| |||||| Sbjct 1659 GCCCGCGTCCTGGCGTTGCGCCGTATGGAAATTACCGATGAACGCTGGCAGCGCGCCATG 1600 Query 8130 AATGCGATTGGCGACGCCTGCCAGGCGGTGGGTTCCAAGGCCTACATCCGCGTCTATGAA 8189 | || || |||||||||||||||| ||| || |||||| ||||||||||||| ||| | Sbjct 1599 CAAGCCATCGGCGACGCCTGCCAGGTGGTTGGCTCCAAGTCCTACATCCGCGTGTATCAG 1540 Query 8190 CGGGTCGGCGACAGCGACCAGTACCAGCAGATCAGCCTCGATATGGCGGGGGTGTGATAT 8249 || || || || | |||||||||| ||| |||||||| ||||| |||||||||||| || Sbjct 1539 CGTGTTGGTGATACCGACCAGTACGAGCCCATCAGCCTTGATATTGCGGGGGTGTGACAT 1480 Query 8250 GG 8251 || Sbjct 1479 GG 1478 >seq8746 Length=2069 Score = 125 bits (138), Expect = 2e-24 Identities = 118/147 (80%), Gaps = 5/147 (3%) Strand=Plus/Minus Query 9320 AGCGAAACCGCCCCGGCCTGGCCGGGACGGTCTGCCGGACGTGGTGGTCCGGTACTGATG 9379 ||||||| ||||||||| | | ||| |||||||||||||||||| |||||||||||||| Sbjct 1745 AGCGAAATCGCCCCGGCGCG-CTGGGGCGGTCTGCCGGACGTGGTTGTCCGGTACTGATG 1687 Query 9380 AGCAGCCACCCATGACGAACGAA--ACCAAGACAGACCGCCAGCGCCGCCTGGCGCGGGA 9437 |||||||||||||||| ||||| ||| | |||| ||| | ||||||||| | || Sbjct 1686 AGCAGCCACCCATGACAGACGAAACACCCAAACAG--CGCAAAACCCGCCTGGCATGCGA 1629 Query 9438 ACGCCAACGGGCGAAGCGCGAGCGCGA 9464 || |||| || ||||| ||||||| Sbjct 1628 GCGTAAACGTGCCCAGCGCAAGCGCGA 1602 Score = 86.0 bits (94), Expect = 1e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 9711 AAAATCCACATCGCCAAGGCCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTC 9770 || ||||||||||||||| | || || |||| || || ||||| || || ||| | Sbjct 1373 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGACGAAACCTACCGGGCCTTGTTG 1314 Query 9771 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACCTAGGGCCGCGCCAGATCGACCACGTA 9830 | ||||| ||||| ||||| |||||||| ||||| ||| |||||||||| | ||| Sbjct 1313 GGCCGCGTGGCGGGTGTGCGTTCGGCCAAAGACCTGACGCCACGCCAGATCGGCGCTGTA 1254 Query 9831 CTTGTCGAACTCCAGCGCCTGGGCTGG 9857 || | ||| | ||| |||||||| Sbjct 1253 CTGGCCGAGTTTGCCCGCTTGGGCTGG 1227 >seq3518 Length=10772 Score = 114 bits (126), Expect = 3e-21 Identities = 315/472 (67%), Gaps = 27/472 (6%) Strand=Plus/Plus Query 3332 GCATGAAATCAAGGCGCTGCGCCCGTTCATTCGCCGCGACTTCACCAAGCTGCTG---CC 3388 ||| ||| |||| || || | ||||||| |||||| || |||||| || || Sbjct 454 GCAGGAACTCAAAGCCCTACAACCGTTCAAGCGCCGCT-CT--ACCAAGAGCATGTACCC 510 Query 3389 GACCGACGTCTATTCCTGCGACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCA 3448 | |||||| | || |||||| |||| ||||||||||||||| | | || | ||| Sbjct 511 GTGCGACGTGTTCACCGCCGACGGGCACAAGTTCGACGCCGAGGTGTTGAATCC-ACGCA 569 Query 3449 C-GGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTC 3507 | ||| ||| | ||| |||||| ||||| || |||| || || || | || | Sbjct 570 CCGGCAAGCCTTACCGCCCGGAAGCAACCACTGTCCTCGATGTCGCAACACG-CAAAGCC 628 Query 3508 C-GGGCTGGTCCACCGGCCTGGCCGAGTCGGCCCTGGTGGTGGTCGATGCCTTGCGCGAC 3566 |||| |||| || |||||||| || | | || | || || |||| || Sbjct 629 TTGGGCATTTCCATTGGTGAAGCCGAGTCCACCATCGGCGTAATGGACGCACTGCGTGAT 688 Query 3567 GCC-TGCACCAAGGGCGGCATCCCGGCCATCTTCTACGTTGACAACGGCTCGGGCTACGT 3625 || |||| || |||||| ||||| |||||||| ||||||||||| |||| | Sbjct 689 GCTATGCAGCA----CGGCATGTTTGCCATGTTCTACGTCGACAACGGCTCAGGCTTTGC 744 Query 3626 CAACCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGATATGAA 3685 |||| ||| | || || | || ||| || | | ||| |||| | |||| Sbjct 745 CAACGACACCGTCCGTGAAGTGG---TCGACCGTCTTGGC------GGCACC---ATGAC 792 Query 3686 GAACAGCCTGCCATACAACAGCCAGGCGCGGGGCGTGATCGAGCGCGTCCACCAGAGCCT 3745 | ||||| |||||||||||||| || ||| | |||||||| |||||| | | Sbjct 793 CCATGCGCTGCCGTACAACAGCCAGGCACGCGGCCTTATCGAGCGTTCCCACCAAACGAT 852 Query 3746 GTGGATTCGCGCCGCCAAGGAACTGCCCGGCTACATCGGCGCCGACATGGAC 3797 ||| || || ||||| | ||| || ||||||||||||| ||||||||| Sbjct 853 TTGGGTTAATGCAGCCAAAAAGCTGACCAGCTACATCGGCGCTGACATGGAC 904 >seq23684 Length=785 Score = 107 bits (118), Expect = 5e-19 Identities = 254/370 (69%), Gaps = 28/370 (8%) Strand=Plus/Minus Query 7509 CGGCCGGCAGCACCCGTTATATCACCCGC--TTCCAGGGCATCACCCTGGCCTGGAGCGA 7566 ||||||| |||||||||| | | || || ||||||||| | ||||||| ||| |||| Sbjct 358 CGGCCGGTAGCACCCGTT-TCT-ACGTGCAGTTCCAGGGCGTGACCCTGGAGTGGCGCGA 301 Query 7567 ACCGATCAGCTAC-CGCGACTTCGCCGGCAGCAAACCCGTAA-----TTCACTGAAAAGG 7620 ||| |||||| | | || | | |||| | | | ||| | | |||||| || Sbjct 300 ACCCATCAGCGCCTCCCGTCCT-GCCGACTGGT--CGCGTCAGACTCTCCACTGA---GG 247 Query 7621 ACTACC---CCATGA----ACGACGTACATATCCCCGAGGGCTACCGGATGGACGGGCAA 7673 | ||| | |||| || || || ||||||| | ||||| || | |||| |||| Sbjct 246 A--ACCTTGCAATGACACAACAACAAAC-TATCCCCAAAGGCTATCGCGTCGACGCGCAA 190 Query 7674 AAGCGCCTGATCCCGGAGGCCACCATCAAGCCCGTTGACCTGGCCCGCGACCAGTTGGTT 7733 ||||| ||||||||||| || |||||||| | ||||||| || || ||||| Sbjct 189 AAGCGACTGATCCCGGAAAGCATGATCAAGCCTATCGACCTGGAGCGGGATGCCTTGGTG 130 Query 7734 ATGGAGCTGGTGGGCAAGGCCAAGGCAGTCCAGAG-CGAGCTGGCCCGCTTCAAGGCTTC 7792 | | ||||||| || ||| || | |||| | || |||||| |||||||| || Sbjct 129 CTTGGCCTGGTGGAAAAAGCCCGCGCCG-CCAGCGACGTGCTGGCGAAATTCAAGGCCTC 71 Query 7793 CGCGTTCGGCGACATCGACGCTTTCGTCGATCTGTCGGTCGAGCAGTACGGCACCAAGCT 7852 || ||||| || || || || || ||||| || | ||||||||||||| || || | Sbjct 70 GGCTTTCGGTGATATTGAAGCCTTTGTCGAACTCAGCGCCGAGCAGTACGGCGCCCAGAT 11 Query 7853 TGGAGGCAAG 7862 || || ||| Sbjct 10 CGGCGGGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119000098312800