Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_026608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq85 89.7 1e-13 >seq85 Length=367292 Score = 89.7 bits (98), Expect = 1e-13 Identities = 206/307 (67%), Gaps = 5/307 (2%) Strand=Plus/Minus Query 38810 CGGCGAATACTTCGATTGGTATTACTTGAACGCA-GCCGACCGGGCCGCGCAAATCCGCA 38868 ||||||| || || |||||||| | | || | || || || |||||| |||| Sbjct 341329 CGGCGAAGGTTTTGACTGGTATTA-TGCATCGGATGCGGATCGAACCGCGCGGCGGCGCA 341271 Query 38869 CGCCTATTACCGACGGTGCCTACGGTAAACCATGGGTATTCCGCAACAAAGACTTCCGTT 38928 |||| || |||||||| | || || | ||||| | |||| |||| ||| || Sbjct 341270 CGCCGATCACCGACGGATCG---GGCAAGGCGTGGGTCTACCGCTACAAGGACATCGAGG 341214 Query 38929 CTTGGTGGAATAACTACCATTACAACCGCCCCGGCTACGTCGAAGACGCTTCGCCGACGG 38988 | |||||||| ||| |||||||||||| ||| |||||| ||| | |||| Sbjct 341213 CCTGGTGGAAAAACCCGCATTACAACCGCAAGGGCGGCGTCGAGAGCGCCAATGCCACGG 341154 Query 38989 GTTGGGTTCCTAATTCAAAGCCGATTTGGTTTACTGAATTCGGCTTTCCTGCGGTCGATA 39048 ||| |||| |||||||| ||| | || ||| | |||| ||| || ||||| | Sbjct 341153 CGTGGCAGCCTATGGGTAAGCCGATCTGGCTGACGGAACTGGGCTGTCCGGCAGTCGACA 341094 Query 39049 AAGGCACCAATCAACCAAACGTTTTCTACGACCCTAAGTCTTCCGAAAGCGCCTACCCCT 39108 | ||| ||||||| || || || || ||| | ||||| ||||| | || | || | Sbjct 341093 AGGGCCCCAATCAGCCCAATGTCTTTCCCGATGCCAAGTCCTCCGAGGGGGCGTTTCCGT 341034 Query 39109 ACTTTTC 39115 | ||||| Sbjct 341033 ATTTTTC 341027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134530890713570