Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq3869 89.7 5e-13 >seq3869 Length=8584 Score = 89.7 bits (98), Expect = 5e-13 Identities = 268/407 (66%), Gaps = 10/407 (2%) Strand=Plus/Minus Query 60071 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 60130 || || || || || ||||||||||| || ||||| ||||| ||||||||||| || || Sbjct 4763 CTGCCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTG 4704 Query 60131 TTGATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 60190 ||||| | || || | |||| || || || ||||| | | || ||| | Sbjct 4703 CTGATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTGAAA 4644 Query 60191 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGC 60250 || |||||| | || || |||||||| || | | ||| ||||| | | || ||| Sbjct 4643 TACGTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCATTCGCGCGCTGGGCAGC 4584 Query 60251 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT--- 60306 || ||||| || ||| |||| || || ||| |||| ||| |||| |||| Sbjct 4583 CCGATCCGCGGCGGCGAAGCCTTCCACACCGG-CTGCATTCCGTTCTACAAGCATTTCCA 4525 Query 60307 GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTA 60366 ||| || |||| || ||||| || ||||| | || || || ||||||| || Sbjct 4524 GAC---CGCGGTGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTCT- 4469 Query 60367 TGTTCCC-ATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGAT 60425 | | ||| || |||||| || | || | | || || |||||||||||||| Sbjct 4468 TCTACCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGTA 4409 Query 60426 TGGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAAC 60472 || | ||||| | || | || ||||| ||| | ||||| ||| Sbjct 4408 CCGACGCCAACCGCGTTCGTCACATGGACTACGGGGTACAGATCAAC 4362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503687817321360