Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027296.1 Length=53721 Score E Sequences producing significant alignments: (Bits) Value seq45 87.8 6e-13 >seq45 Length=70125 Score = 87.8 bits (96), Expect = 6e-13 Identities = 196/290 (68%), Gaps = 11/290 (4%) Strand=Plus/Plus Query 36344 CCATGCACATATGC-CGGCATTTGAGCAAGACGCCGACGCCGCGCGGTTTGAGCTCGGAT 36402 |||||||||||||| |||| | || || || | | ||||||||||| ||| || Sbjct 36135 CCATGCACATATGCTCGGCCTC-GATCATGATGGCCACGCCGCGCGGACGCAGC---GAC 36190 Query 36403 TCGAAAAGCGCGTTGGCGATCTGCACCGTCAATCGTTCCTGAACCTGGAGGCGTCGAGCG 36462 | | ||| ||||||||||| | |||| | ||||| ||| ||||| || || Sbjct 36191 CCCTGGATCGCATTGGCGATCTGGGCTGTCATGCTCTCCTGCGTCTGCAGGCGGCGGGCA 36250 Query 36463 AACACGTTAGCCACTCGGCTGAGTTTCGAAAGCCCAAGAACGCGC---CCATCCGGAATG 36519 | | | | || ||| || ||||| || || | || | ||||| || | Sbjct 36251 TAGATATGCACGACGCGGGCGATCTTCGACAGGCCGACCACTTTCTCGCCATCGGGCAGA 36310 Query 36520 TAAGCAATAGTCGCCGTGCCGAAGATGTCGGCAAGGTGATGCTCGCATTTCGAATAGATC 36579 || || | | |||| |||||| |||| | | |||||||||||| | |||| ||| | Sbjct 36311 TAGGCGACATGCGCCTTGCCGATGATGGGAACCATGTGATGCTCGCAGTGCGAAAAGAAC 36370 Query 36580 GGAATGTCCTTGACCAAGACCATCTCGTCATA---GGCACCTTCCTCGAA 36626 || |||||||||| ||||| || |||||||| |||| |||| || || Sbjct 36371 GGTATGTCCTTGATGAAGACGATGTCGTCATAACCGGCAACTTCTTCAAA 36420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171728018218442