Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq3869 165 8e-36 >seq3869 Length=8584 Score = 165 bits (182), Expect = 8e-36 Identities = 302/438 (69%), Gaps = 6/438 (1%) Strand=Plus/Plus Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414 ||||||||| || |||||||| | | || |||||||| || ||||||||||||| Sbjct 4362 GTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACCACGGTTGTT 4421 Query 58415 CTTCAGCACGATCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTGA 58474 |||||||| | || | || | | | |||||||| ||||| | | |||||| | Sbjct 4422 TTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAGGGTTGCCGC 4481 Query 58475 GCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAACGAACTTCTTGATGAA 58534 |||||| || | || ||||| || ||| |||| | ||| | |||| ||| Sbjct 4482 GCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATGCTTGTAGAA 4541 Query 58535 CGGGATCGTACCGGTATG--AGTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACGG 58592 ||| || ||||| || || | || | || ||||||| | | ||||| || || Sbjct 4542 CGGAATGCAGCCGGTGTGGAAGGCTTCGC--CGCCGCGGATCGGGCTGCCCAGCGCGCGA 4599 Query 58593 ATAGCGCC-GAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGT 58651 || ||||| | || | ||||| || || |||| || ||||||||||| || ||| | Sbjct 4600 AT-GCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAATCGCGCT 4658 Query 58652 GCCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAA 58711 | || || | ||| |||||| |||| || ||| |||||| || || |||||||| Sbjct 4659 GGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGAGCTGAA 4718 Query 58712 CTGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAGACTGAATTTACCAGT 58771 ||||||||| ||||||||||||| | |||||| || || || || || |||| || Sbjct 4719 CTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAGCGAGATTTTAAAGGT 4778 Query 58772 AGACGCATAGTTGTAGAA 58789 ||| | || |||||| Sbjct 4779 GGACACCGCGTCGTAGAA 4796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518600953550400