Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq2516 208 8e-49 seq2261 134 1e-26 >seq2516 Length=21774 Score = 208 bits (230), Expect = 8e-49 Identities = 156/183 (85%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 60698 TTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60757 ||||| || || ||||||||||| ||||| |||||||||||||||||||| |||||||| Sbjct 1961 TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGA 1902 Query 60758 GTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60817 ||| ||||| || || || ||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1901 GTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATG 1842 Query 60818 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACC 60877 || ||| || || ||| ||||| |||||||| ||||| ||||||||||| ||||| || Sbjct 1841 CTCAACCGCGTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCC 1782 Query 60878 CTC 60880 || Sbjct 1781 TTC 1779 >seq2261 Length=3986 Score = 134 bits (148), Expect = 1e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 60697 ATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60756 |||||| ||| ||| |||||||| | ||||| || |||||||||| ||||| | Sbjct 688 ATTACATGGTCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGG 629 Query 60757 AGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 60816 ||||||| || || || || || ||||||||||||||||||||||||||||||||||| | Sbjct 628 AGTTAAAACGTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGT 569 Query 60817 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCAC 60876 | | || || ||| |||| || || ||||| ||||||||||| ||||||| Sbjct 568 TTTCCATCGCGTCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCAC 509 Query 60877 CCTCAAT 60883 | || || Sbjct 508 CTTCGAT 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534009914772040