Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027383.1 Length=44613 Score E Sequences producing significant alignments: (Bits) Value seq373 82.4 2e-11 >seq373 Length=63667 Score = 82.4 bits (90), Expect = 2e-11 Identities = 135/192 (70%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 12851 ACCACCGTTGCCGTCGCTGACCAACTGATCGCAGCGCTGCGCAATCTGGTAGAGCGCGTA 12910 ||||||| ||||| |||| |||||||||| ||| ||||||||||| |||| Sbjct 29837 ACCACCGCGCCCGTCAGGAACCAGCTGATCGCAGTACTGTGCAATCTGGTACAGCGT--- 29781 Query 12911 CCGGTTT--AACATTTGCGGTT-TGATACGCCGACCGAGGCCGAAGCGCTCAGTAATACA 12967 || || || ||| ||| | | | ||| |||||| || || || |||| || Sbjct 29780 CCATTTCGAAATATTGGCGCTGCTCAGACGATTACCGAGACCAAAACGGTCAGCTGTAAC 29721 Query 12968 AATATCGTACCAGTGCCACGCAGGGTTATCCGTCCATGCGCGTTTAAACGTGCCGTCCCA 13027 ||| ||||| || ||| || |||||||||||||| || | ||||||| |||| ||| Sbjct 29720 AATGTCGTAATAGATCCAGGCCGGGTTATCCGTCCAGGCCCATTTAAACCCGCCGGTCCA 29661 Query 13028 GTCCCCGGAATA 13039 | | |||| ||| Sbjct 29660 GACGCCGGTATA 29649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142592187696050