Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq2100 111 2e-19 seq7636 93.3 6e-14 seq345 84.2 3e-11 >seq2100 Length=19628 Score = 111 bits (122), Expect = 2e-19 Identities = 191/275 (69%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGC-GAT 197671 ||||||| |||||||| |||||||||| | || |||||| || | ||| || Sbjct 19070 TGAAACAGTATCTTGATTTGATGCAGAAAGTGCTCACCGAGGG-CACGCCAAAAAATGAC 19128 Query 197672 CGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAA 197731 || || || || || ||| | || | || || | |||||||||||| | ||| || Sbjct 19129 CGCACCGGCACTGGCACGATCTCCATTTTCGGCCATCAGATGCGTTTTAACCTGCAGGAA 19188 Query 197732 GGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTG 197791 || |||||| | || || || ||| || | || || || ||||||||||||||| Sbjct 19189 GGCTTCCCGCTGGTGACCACCAAGCGCTGTCATTTACGCTCCATCATCCATGAACTGCTG 19248 Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851 |||||||| || || ||||||| | |||||| | || ||| ||| ||||| ||| Sbjct 19249 TGGTTCCTGCAGGGCGACACCAACATCGCCTATCTGCACGAGAACAACGTCACCATCTGG 19308 Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886 |||||| ||||| ||||| |||| || || Sbjct 19309 GACGAGTGGGCGGATGAGAATGGCGACCTGGGGCC 19343 Score = 100 bits (110), Expect = 4e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 198046 CGACCAGATCTCTAAGGTGATTGACCAGCTGCGTAACGATCCTGACAGTCGCCGTATTAT 198105 |||||||||| | |||||| |||||||| ||||| || ||| ||||| || || Sbjct 19395 CGACCAGATCAGCACGGTGATGAACCAGCTGAAAAACGACCCGGACTCCCGCCGGATCAT 19454 Query 198106 TGTCAGCGCATGGAACGTGGGTGAGTTGGATCAAATGGCGTTAGCTCCGTGTCATGCGTT 198165 ||| ||||||||||| || ||| ||||| |||||||| | || ||||| || || || Sbjct 19455 CGTCTCGGCATGGAACGTCGGCGAGCTGGATAAAATGGCGCTGGCGCCGTGCCACGCCTT 19514 Query 198166 CTTTCAGTTCTAC 198178 ||| ||||||||| Sbjct 19515 CTTCCAGTTCTAC 19527 >seq7636 Length=2863 Score = 93.3 bits (102), Expect = 6e-14 Identities = 177/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 198350 CGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCTTACGCATTACTCGTG 198409 ||||| | ||| | ||||||||| |||||| ||||| ||| | || || ||| Sbjct 1773 CGCAGCTCAGATGTATTCCTCGGCCTGCCGTACAACACCGCTGCCCTGGCGTTGCTCACC 1714 Query 198410 CACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATTTGGACGGGCGGTGAC 198469 || ||| | ||||||||| || || | || ||| |||| || || ||| Sbjct 1713 CATATGCTGGCCCAGCAGTGCGACCTGATCCCTCACGAGATCATCGTCACCACGGGCGAC 1654 Query 198470 ACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCAGCTGACGCGTGAGCCGTTA 198529 || || |||| || || |||| ||| | || ||||||| |||| |||| Sbjct 1653 ACCCACGCCTACAGCAACCACATGGAACAGATCCAGACCCAGCTGGCGCGCACGCCGAAG 1594 Query 198530 CCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTATCTTCGATTATAAATTCGAA 198589 | ||| ||||| | |||||||| ||||| | || |||| |||||| ||||||||| Sbjct 1593 AAGCTGCCGGAACTGGTGATCAAGCGCAAACCCGCGTCGATCTACGATTACAAATTCGAA 1534 Query 198590 GATTTTGAGATCGTTGGGTAT 198610 |||||||| ||||| || ||| Sbjct 1533 GATTTTGAAATCGTGGGCTAT 1513 >seq345 Length=175672 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 197666 GGCGATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTG 197725 ||||| ||||| || ||||| || | ||| || || || ||||||||| || ||| || Sbjct 150402 GGCGACCGTACCGGGACAGGCACACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTG 150461 Query 197726 CGTAAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAA 197785 ||||| || | ||||| |||||||| || || || || ||||| || Sbjct 150462 TCGGCGGGTTTTCCTGCCCTGACGACCAAGAAACTGCATCTCAAATCCATCATCCACGAG 150521 Query 197786 CTGCTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACC 197845 |||||||||||||| | || || || |||| | ||||| | || |||||||| || Sbjct 150522 CTGCTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGACG 150581 Query 197846 ATTTGG 197851 || ||| Sbjct 150582 ATCTGG 150587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768922199653160