Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq19 123 2e-23 >seq19 Length=770976 Score = 123 bits (136), Expect = 2e-23 Identities = 472/728 (65%), Gaps = 30/728 (4%) Strand=Plus/Plus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT---GCG 43912 || ||||||||||| || ||||| || || |||||||| | | ||| || | | Sbjct 360139 GCTTTTTTTGCTGCAAGTGACGGCATTGTAAATGAAAACCTTGC-AGTGAACTTCATGAG 360197 Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 | ||||| || | || ||||| || ||||||||||| || || || || ||||| Sbjct 360198 C--GAAGTACAGCTTCCCGAAGCCCGTTGTTTTTATGGCTTCCAGATCATGATGGAAAAC 360255 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAG 44032 || || || |||| || || ||||| ||||| || || |||||| | || || Sbjct 360256 ATCCACTCTGAAACCTATGCGCTGCTGATCGATACCTATATTAAAGATCCTGAAGAAAAA 360315 Query 44033 CATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCC 44092 | | |||| |||| |||| || || ||| | || | |||||||| ||||| Sbjct 360316 GACAGGCTGTTCCATGCCGTAGAGACGGTTCCTTGTGTAAAGAAAAAAGCAGAATGGGCA 360375 Query 44093 CTTAAATGGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTT 44149 | ||||| | |||| |||| ||||| | || || || || | Sbjct 360376 TTGCGCTGGATTGAGGGCGGAAAT------TTTGCCGAACGTTTGGTGGCTTTCGCCGCA 360429 Query 44150 GTGGAAGGCATTTTCTTTT-CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGG 44208 ||||||||||||||||| | ||| | | || | || || ||||| || ||| |||| Sbjct 360430 GTGGAAGGCATTTTCTTCAGCGGGAGCTTCTGTT-CGATCTTCTGGTTGAAAAAAAGAGG 360488 Query 44209 TTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTG 44268 ||||||| ||| | || ||| |||||||| || | ||||| || | ||||| Sbjct 360489 CCTGATGCCAGGGCTAACCTTTAGTAATGAGTTGATTTCCAGAGATGAGGGGATGCATTG 360548 Query 44269 CGATTTTGCTTGCTTG-TTACTTGGATA-TCTAGGAGACGATAAGCCTTCATGTAAGACA 44326 || ||||| ||| || || | || || | | | | |||| | ||| | Sbjct 360549 TGAATTTGCCTGCCTGCTTTATAAAATGCTCAAAAATAAACTGAGCCA----GGAAGTCG 360604 Query 44327 ATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTA 44386 | | || ||| | || || ||| | || ||| | |||||||| ||| || || Sbjct 360605 TTCATGGA-ATTATCCGCGACGCGGTAGAAATCGAAAAGGAATTTATTACAGATGCCTTG 360663 Query 44387 CCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCA 44446 || || | || || ||||||| | ||||| || |||||||| | ||||| Sbjct 360664 CCGGTTGCCCTGATCGGGATGAATGCAAAACTGATGTCACAGTATATTGAGTTTGTTGCA 360723 Query 44447 GATCGTTTACTTTTGGAACTGGGTTGCGATAA-ACACTATATTGTACAA--AACCCGTTT 44503 || | | || ||||||||||| ||| | | ||||| | | | || |||||| Sbjct 360724 GACAGATGGCTGCAGGAACTGGGTT---ATACCAAAATATATCATGCCACCAATCCGTTT 360780 Query 44504 GATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGA 44563 ||||||||||| | || || || |||||||||| || || ||||| ||||| || || Sbjct 360781 GATTTTATGGAGATGATCTCCCTGCAAGGCAAAACCAATTTCTTTGAGAAACGTGTGGGT 360840 Query 44564 GAATATCA 44571 || ||||| Sbjct 360841 GATTATCA 360848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397319268553135