Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027994.1 Length=41632 Score E Sequences producing significant alignments: (Bits) Value seq7234 116 1e-21 >seq7234 Length=2716 Score = 116 bits (128), Expect = 1e-21 Identities = 609/953 (64%), Gaps = 28/953 (3%) Strand=Plus/Plus Query 6046 ATGTCTCTGTCAGATATGAAGGTTTATAACGACGATATCGTCGGTACCACTATCGAACTG 6105 ||||| ||||| | ||| |||||| ||||| | ||| | | ||| |||| | Sbjct 1381 ATGTCCCTGTCGCAAATGCAGGTTTTCAACGAATACATCATGCCAGCGACTCTCGAGACG 1440 Query 6106 CTTGGTCAGAAAACTGACCAGTTT-AACGCGGCCTCCGGTGGCGCAATTGTACTGTCTAC 6164 || | |||| | || || ||| ||||| || | |||||||||| || |||||| | Sbjct 1441 CTGGATCAGTAT-CTCGCCGCTTTCAACGCCGCAAGCCGTGGCGCAATCGTGCTGTCTCC 1499 Query 6165 TGCCTCATGGCGCGGTGATTTCTCCCGTGAGTCTTTCTTTAACCAGA---TTGCCTCCGC 6221 || | | ||||| ||| || ||||| ||||| ||||| | ||| | || Sbjct 1500 TGACGGCTTCACTGGTGACTTCCTCCAAGAGTCGTTCTT---CCAGACCTTGGCCGCTGC 1556 Query 6222 TAAACGCCGCGTTGACCGTTACGCCGCTATCGCGTCTCAGGCAGCTACCGCGCTGACTCA 6281 | |||||||| || || ||| | | | ||| || || || |||| |||||| | Sbjct 1557 CCAGCGCCGCGTGGATCGCTACAGCACGAACGCCGCTGTCGCTGCAACCGATCTGACTGA 1616 Query 6282 GGGCGAGCATGTAGGCGTTAAAGTCGCTGGCGGCTTCGGACCGGTACTGTTCGAGCCTGC 6341 | || || || || ||||| || |||||||| ||| | | | |||||| | Sbjct 1617 GCTGAAGAATACTTCGGTGAAGGTCGCCGGTGGCTTCGGTCCGATCCGCTACGAGCCATC 1676 Query 6342 GCAAATGACCTGGCTGAA-CGAAGACCCG-GCGAGCG--CGATTCGT-GCTATTTCCGAA 6396 ||| ||||| |||||| | || | ||| || || ||| || || | | || Sbjct 1677 GCAGATGACTTGGCTGGAGCGTCCAACCGCGCAAGGCATCGAA--GTCGCCAGTCGCGCG 1734 Query 6397 GGCTTCTCTGACGCACTGTTAGCGGACCAGCTTAACACCGCTGTTGGTGCCGCCGTTGCC 6456 ||| |||| ||| | ||||||||| ||||| || | | ||| |||||| Sbjct 1735 ---TTCGCTGAAATCCTGCTGAAGGACCAGCTGAACACAGCGATCGCCGCCCTGGTTGCC 1791 Query 6457 GCGGTATCAGGTCAGACTGCACTGGTTAACAATGTATCCGCGACCGCTGGCTTGTCCCTG 6516 ||| | | | ||| | || ||| ||| |||| || || ||||||||| | || Sbjct 1792 GCGATCACCGCCCAGGCCGCCGCGGTCAACGATGTGTCGGCTACCGCTGGCATCACCT-- 1849 Query 6517 AACG-TG--CTGAACAACAGCCACGCTAAATTCGGCGAC-CAGTCTCAGCTGCTGATTAC 6572 ||| || ||||||||| ||||| || ||||||||| || | ||| ||| | || Sbjct 1850 -ACGCTGGCCTGAACAACGCACACGCGAAGTTCGGCGACGCAAGC-CAGAACCTGGTCAC 1907 Query 6573 CGACATCATGACTGGTGCTGCTTATCACACGCTGGTAGATAAAGCGCTGACTAACGCAAA 6632 | | | ||| || | ||||||| | |||| | | ||| | ||| | Sbjct 1908 CCAGGTGATGCAGGGCACGAGCTATCACAAGTTGGTTGGCCAGAACCTGGCGAACCAGCA 1967 Query 6633 CCAGCTGTTCGTTGCCGGTAACGTTATGGTTGTCGATGTTCTCGGCAAGCGTTACGTAAT 6692 ||||||||| ||||| ||||| || || || ||||||||||| | ||| | Sbjct 1968 GCAGCTGTTCCAGGCCGGCAACGTCCGCGTGGTGGACATTCTCGGCAAGATCTCCGTTGT 2027 Query 6693 CTCTGACATTCCTGCGCTGTACGAGGCCGGTACTCCGAACAAGACTAAGGTCCTGTCCGT 6752 | || || |||||| || |||| || ||||||||| | |||||||| | Sbjct 2028 GACGGATGCCCCGGCGCTGATGCAGACCGGCACCCCGAACAAGGAAATCATCCTGTCCCT 2087 Query 6753 AGTTGCAAACGGCATCA-TCGTTGATAATGCTTCTGATATTATCAGCAACATTGATACCA 6811 || |||| || | ||||| | | | || || ||||||||| | | || Sbjct 2088 GGT-GCAAGGCGCTGCGCTCGTTCACGACGGCCGCGACATCATCAGCAACGTCCAGACTG 2146 Query 6812 GCAACGGTAACACCCGCATCCAGACCACCTGGCAGGCGGATTACAGCTTCGGCCTGAAAC 6871 |||||| || || ||| | ||||| ||| | || |||| |||||| || | Sbjct 2147 TCAACGGCAAGGAGCGTATCGAAACCACGCTGCAAACCGACTACACCTTCGGTTTGGGCC 2206 Query 6872 TGAAAGGCTATAGCTGGGATGTCGCCAACGGCGGTAAATCTCCGCTGGACGCAGAACTGT 6931 |||| ||||| | |||||| | ||| |||||| || || || ||||| |||||| Sbjct 2207 TGAAGGGCTACACCTGGGACACCACCACCGGCGGCAAGTCGCCTACCGACGCCGAACTGG 2266 Query 6932 TCACCGCGACCAACTGGGACAAAGCTGTTGCCGAGAGCAAACACACCCTCGGT 6984 |||| |||||||||||||| ||| || | ||| |||||| |||| Sbjct 2267 CGACCGGTACCAACTGGGACAAGACTGCCACCAGCATCAAGCACACCGCCGGT 2319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133056185194156