Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028695.2 Length=40491 Score E Sequences producing significant alignments: (Bits) Value seq7234 158 3e-34 >seq7234 Length=2716 Score = 158 bits (174), Expect = 3e-34 Identities = 556/846 (66%), Gaps = 38/846 (4%) Strand=Plus/Plus Query 13474 TTCAACGCGGCTTCCGGTGGCGCTATCGTACTGTCTACCGCCGCCTGGCGTGGTGACTTC 13533 |||||||| || | ||||||| ||||| |||||| | | || || |||||||||| Sbjct 1462 TTCAACGCCGCAAGCCGTGGCGCAATCGTGCTGTCTCCTGACGGCTTCACTGGTGACTTC 1521 Query 13534 TCCCGCGAATCTTTCTTTAACCAGA---TTGCTTCCGCGAAACGTCGTGTTGACCGCTAC 13590 || || || ||||| ||||| | || | || | || || || || |||||| Sbjct 1522 CTCCAAGAGTCGTTCTT---CCAGACCTTGGCCGCTGCCCAGCGCCGCGTGGATCGCTAC 1578 Query 13591 GCCGCAATCGCTACCCAAGCGGCAACTGCTCTTACCCAG--GGCGAGCACGTAGGCGTTA 13648 | | | ||| | || ||||| | ||| || || | || || | || | | Sbjct 1579 AGCACGAACGCCGCTGTCGCTGCAACCGATCTGACTGAGCTGAAGAATACTTCGGTG--A 1636 Query 13649 AAGTCGCTGGTGGTTTCGGTCCTGTTCTGTTCGAACCGGCGCAAATGACCTGGCTGAA-C 13707 | ||||| ||||| |||||||| | | | ||| || |||| ||||| |||||| | | Sbjct 1637 AGGTCGCCGGTGGCTTCGGTCCGATCCGCTACGAGCCATCGCAGATGACTTGGCTGGAGC 1696 Query 13708 GAAGACCCGGCGTCCGCTATCCG---CGCGATTTCCGAAGGCTTCTCTGATGCGCTGCTG 13764 | | ||| || | ||| ||| | | || ||| |||| |||||| Sbjct 1697 GTCCAACCG-CGCAAGGCATCGAAGTCGCCAGTCGCGCG---TTCGCTGAAATCCTGCTG 1752 Query 13765 GCTGACCAGCTCAACACTGCGGTAGGCTCCGCTGTTGCCGCAGTGTCCGGCCAGGCTGCT 13824 |||||||| ||||| ||| | | | || |||||||| | ||| |||||| || Sbjct 1753 AAGGACCAGCTGAACACAGCGATCGCCGCCCTGGTTGCCGCGATCACCGCCCAGGCCGCC 1812 Query 13825 CTGGTTAATGACGTATCCGCAACCGGTGGTCTGACCCTGAACG-TG--CTGAACAACAGC 13881 ||| || || || || || |||| ||| | ||| ||| || ||||||||| Sbjct 1813 GCGGTCAACGATGTGTCGGCTACCGCTGGCATCACCT---ACGCTGGCCTGAACAACGCA 1869 Query 13882 CACGCTAAATTCGGCGAC-CAGTCACAGCTTCTGGTGACCGACGTTATGACCGGCGCGGC 13940 ||||| || ||||||||| || | ||| ||||| ||| | || ||| ||| || Sbjct 1870 CACGCGAAGTTCGGCGACGCAAGC-CAGAACCTGGTCACCCAGGTGATGCAGGGCACGAG 1928 Query 13941 ATGGCACAAGCTGATTGACAAGGCGCTGACCAACTCAAGC--CAGTTGTTCGCCTCCGGC 13998 | |||||| || ||| | || ||| | ||| ||| ||| ||||| ||||| Sbjct 1929 CTATCACAAGTTGGTTGGCCAGAACCTGGCGAACC--AGCAGCAGCTGTTCCAGGCCGGC 1986 Query 13999 AACGTTATGGTCGTTGATATCCTGGGTAAACGTTATGTTATCTCTGATATCCCGGCTCTG 14058 ||||| || || || || || || || | ||| | | ||| |||||| ||| Sbjct 1987 AACGTCCGCGTGGTGGACATTCTCGGCAAGATCTCCGTTGTGACGGATGCCCCGGCGCTG 2046 Query 14059 TACGAAG-CTGGTACCCCGAACAAGTCGAAAG--TGCTGTCTGTCGTGGCTAACGGTATT 14115 | | || | || |||||||||||| |||| | ||||| | ||| || | Sbjct 2047 -ATGCAGACCGGCACCCCGAACAAG--GAAATCATCCTGTCCCTGGTGCAAGGCGCTGCG 2103 Query 14116 ATCGTTGATAACGCGTCCGACATCATCAGCAACGTCGACAC-GTCAAACGGCAACACCCG 14174 ||||| | ||| ||||||||||||||||||| | || ||| |||||||| || Sbjct 2104 CTCGTTCACGACGGCCGCGACATCATCAGCAACGTCCAGACTGTC-AACGGCAAGGAGCG 2162 Query 14175 CATCCAGACCACCTGGCAGGCTGACTACACCTTCGGTCTGAAACTGAAGGGTTACTCCTG 14234 ||| | ||||| ||| | ||||||||||||||| || |||||||| ||| |||| Sbjct 2163 TATCGAAACCACGCTGCAAACCGACTACACCTTCGGTTTGGGCCTGAAGGGCTACACCTG 2222 Query 14235 GGACGTTGCGAACGGCGGCAAATCACCACTGGACGCAGAGCTGTTTACCGCGACCAACTG 14294 |||| | | ||||||||| || || ||||| || ||| |||| |||||||| Sbjct 2223 GGACACCACCACCGGCGGCAAGTCGCCTACCGACGCCGAACTGGCGACCGGTACCAACTG 2282 Query 14295 GGACAA 14300 |||||| Sbjct 2283 GGACAA 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129406209060422