Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028701.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq1800 111 3e-20 seq7329 84.2 5e-12 >seq1800 Length=1271 Score = 111 bits (122), Expect = 3e-20 Identities = 283/428 (66%), Gaps = 2/428 (0%) Strand=Plus/Plus Query 14477 CCGGCAAACTGTACGGATATTGCACCCCCTGATATTCCCGCCAGTCATATTG-CGGTATT 14535 || |||||| |||| ||||||||||| || |||||||| || || | | || | || || Sbjct 35 CCAGCAAACAGTACCGATATTGCACCACCAGATATTCCGGC-AGGCTTCGTGGCTGTTTT 93 Query 14536 TGACGCTGAAACCGAAACGTGGAGTCTGCATGAGGACCACCGTGGCGAGACGGTTTACGA 14595 || ||| | | ||||| ||| ||| ||||| || || | |||||||| || Sbjct 94 CAACAGTGATGAGGCATCGTGGCATCTCGTTGAAGACCATCGGGGTAAAACGGTTTATGA 153 Query 14596 CACAACAACCGGCAATCAGGTTTATATCTCCGCTCCCGGCCCGCTACCTGAAAACGTCAC 14655 | | ||||| | | | | ||| || | | ||| ||| |||| ||||| || || Sbjct 154 CGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTAC 213 Query 14656 ATCAGTTTCACCTGATGGTGAATATCAGAAATGGGATGGTAAGACGTGGGTAAAAGACGA 14715 | | || || | || ||||||||||| ||| | || | | ||||| || || Sbjct 214 CTGGTTGTCGCCGGGAGGGGAATATCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATAC 273 Query 14716 AGCGGCTGAAACAGCGACCAGACTTCGTGAAGCTGAAGGAACCAAAAGCCGTCTTTTGCA 14775 | || |||| | | | | | || || || |||| ||| |||| | | || |||| Sbjct 274 GGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCAGAAGAAACAAAAAACAGCCTGATGCA 333 Query 14776 AACAGCAGCGGAGAAAATCGCGCCGTTACAGGATGCTGTTGATCTTGGAATCGCAACAGA 14835 ||| ||| | || ||||| | ||||||||||| ||||| | ||||||||| || Sbjct 334 GGTAGCCAGTGAGCATATTGCGCCACTTCAGGATGCTGTAGATCTGGAAATCGCAACGGA 393 Query 14836 TGATGAGAAAGCGCAACTCGACGAGTGGAAAAAATACAGGGTGTTGGTAAACCGGGTGGA 14895 || || | || || || | ||||| || || |||||||| | ||||| || | Sbjct 394 GGAAGAAATCTCGTTGCTGGAAGCCTGGAAGAAGTATCGGGTGTTGCTGAACCGTGTTAA 453 Query 14896 TACATCAA 14903 |||| ||| Sbjct 454 TACAACAA 461 >seq7329 Length=1002 Score = 84.2 bits (92), Expect = 5e-12 Identities = 182/270 (67%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 282 CCCAGCCAGTCGTTTAACTCTTTCAGGCTTTCTTGTATCGGGGCCAGTTCGTTGATGGAA 341 |||||||| ||||| | || ||| || | || | ||| |||| ||||||| | Sbjct 379 CCCAGCCACTCGTTGACCTGGGCCAGCCTCGCCTGCAACGGCTCCAGCTCGTTGACCGCC 320 Query 342 AACACCTTCGCCGCTTTCT-CTACGTCGCCGAAGCCACCGGAGTTATTCGGCATTACCCC 400 | |||| || || | | | ||| | || || || || | ||| | ||||| | || Sbjct 319 CAAACCTCAGCAGCCTCCCGCAACGAC-CCAAAACCGCCCGCGTTCTGCGGCACGATGCC 261 Query 401 CATCAGAACGGGCGGCACACGGTGCGCGGCTAACAGGTCGTCGCGGGTGGCGTCTTTGAT 460 ||||| || || | || ||| || | ||| ||||| ||| || || |||||| Sbjct 260 CATCAACTGCGGTGGAATGCGCAACGCCGCGAGCAGATCGTCACGGCTGATGTTTTTGAT 201 Query 461 GCCGGTAAACTCATCCTTCGCCGCCACCTGGCTGAACGGCATAATTTGCAGGCCGTCTTT 520 | | || || ||||| ||||| |||| ||| | ||| || | || | ||||||||| Sbjct 200 CGAGCTGAATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTT 141 Query 521 TTTCCCGCCCGCCGCGTAGACAAACAGGTT 550 || || ||| |||||| ||||||||||| Sbjct 140 CTTGCCTGCCGGCGCGTACACAAACAGGTT 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107071298135154