Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028760.1 Length=49037 Score E Sequences producing significant alignments: (Bits) Value seq373 221 4e-53 >seq373 Length=63667 Score = 221 bits (244), Expect = 4e-53 Identities = 421/618 (68%), Gaps = 3/618 (0%) Strand=Plus/Plus Query 28245 GGACGGTTCGATTACCAACGCTAAGATCGGTAATGTCATTCAGTCCAATAACTACATAGC 28304 ||||||||| ||||| ||||| ||||||||||| | || | || ||||||| | | Sbjct 40313 GGACGGTTCCATTACGAACGCGAAGATCGGTAACGAGATCCGCTCGAATAACTTTGTTGA 40372 Query 28305 CGGGGAACAAGGATGGATGATTAACAAGAATGGTTGGTCTGAATTCCAGAACACTACTGT 28364 || ||||| ||| || |||| |||| | || | ||| | ||| | || Sbjct 40373 TGGCTCGCAAGGCTGGCGTATCGCCAAGGATGGCTCTTCGCAGTTCAATAACGTGATCGT 40432 Query 28365 TCGCGGCACGATCTATGCGACTGACGGTATATTTAAGGGTACAGTGCAGGCAGAAGCGTT 28424 || |||| | | | |||| | ||| | || || || || ||||| || |||| Sbjct 40433 CCGTGGCAGGGTTGAAGCGAATAGCGGCGTGTTCCGTGGCACTGTCCAGGCGGATTCGTT 40492 Query 28425 TATCGGAGATATAGCAGTGGCAAAACGCTATGACAGCATGACGCTACGACGCAACCAGAC 28484 || || || || || ||||| ||| | || |||||| |||| | || ||||||||||| Sbjct 40493 CATTGGTGACATTGCGGTGGCCAAAAGTTACGACAGCCTGACTTTCCGCCGCAACCAGAC 40552 Query 28485 TGTGCAGCGCGATGGATCTTACCAGAATCGTGGTTATGGGATGACTGTAGTTCTCTCCTG 28544 || ||||| | || | || ||||| | || ||| | ||||| || ||||| |||| Sbjct 40553 GGTACAGCGGAACGGTGCGTATCAGAACAGGGGGTATAGCATGACAGTGGTTCTGGCCTG 40612 Query 28545 CACGCTGATTGGTGAGACATATGGAACTGGCGCGTCAAACTTGGGCTATACCGTTGATGT 28604 ||| ||| | | |||| ||||| || ||| || | |||| |||||| |||| | Sbjct 40613 CACCCTGGTGTGCCAGACCTATGGGACGGGCA-GTGG--CCTGGGGTATACCTCTGATAT 40669 Query 28605 AACTTTCAACATTGGCGGCCAGCAGGCTGTTCGCCGCATTTATATTGATGCTGGTAACAT 28664 || ||||||||||| || ||| ||| ||||| || | | ||||| ||||| || Sbjct 40670 TACGTTCAACATTGGTGGGCAGGAGGTAACCCGCCGTATCTTCGTCGATGCCGGTAATAT 40729 Query 28665 CTCCACCGGAACTACTGCGGTAGAACTTCGATTCGCTGCTGACTTGGTTGCTGATAACAA 28724 | | ||| || || || | ||| | || || || || | ||| |||||| |||| Sbjct 40730 CACAGGCGGCACCACGGCCTTTGAATTGCGGTTTGCCGCGCGCCTGGATGCTGACTACAA 40789 Query 28725 CAATGTTAGCTTCTTTGTGAAGGCCACTGGTCGAGATGCCGTCACCGACTATACCGTGGT 28784 |||||| |||||||| | | || | ||||| ||||| | || || ||| Sbjct 40790 CAATGTCGGCTTCTTTATCAGAGCGTCAGGTCGTACTGCCGCGATTGATTACACCTGCAC 40849 Query 28785 TGTCGATAACATCACGGCCACGGCGTTCCGCACGAACAGCAACTCATTCAGCTAACACAG 28844 ||||| |||||||| || || || || || ||| |||||| ||||| |||||||| || Sbjct 40850 AGTCGAGAACATCACCGCAACCGCATTTCGGACGGACAGCAGTTCATTTAGCTAACAGAG 40909 Query 28845 ACCCCGCAAGGGGTCTTT 28862 ||||| |||||| |||| Sbjct 40910 GCCCCGAAAGGGGCCTTT 40927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156744242398626