Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq501 105 7e-18 seq2261 89.7 5e-13 >seq501 Length=12468 Score = 105 bits (116), Expect = 7e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 64854 ATAAAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCT 64913 || |||||| || | ||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct 11028 ATTAAATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCT 11087 Query 64914 CTATCCAACTGAGCTAAG 64931 ||||||| |||||||||| Sbjct 11088 CTATCCAGCTGAGCTAAG 11105 >seq2261 Length=3986 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 55540 AGTAAATGTTCTGTTAATAACATCTTCTTTCTGTTCTGCAGTCAGAGAATTAAATCTGAC 55599 ||| || || | | |||||||||| | | ||||||| ||||| || ||||| | || Sbjct 675 AGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGGAGTTAAAACGTAC 616 Query 55600 GGCATACCCAGAAACGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAGCATC 55659 ||| || ||||| || || || || | || ||||||||||| || | ||| | || || Sbjct 615 GGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCATCGCGTC 556 Query 55660 TAACAACATTTCTTTATTAAGAACATTGACATTCAGATGTTGTCCACCTTCGAT 55713 | || |||||| || | || || || ||||| || || ||||||||||| Sbjct 555 GAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCACCTTCGAT 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518053946623080