Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq2261 98.7 7e-16 >seq2261 Length=3986 Score = 98.7 bits (108), Expect = 7e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 106572 ATTGAAGGTGGTCAACACCTAAATGTCAATGTGTTAAGTCGTGATCAGCTTTTGGATGCA 106631 || ||||||||||| ||||| || || || || | | || || ||| | || || Sbjct 502 ATCGAAGGTGGTCAGCACCTGAACGTGAACGTCATGAACCGCGAAATGCTGCTCGACGCG 561 Query 106632 CAGAAACATCCTGAAAAATACCCTCAATTAACTATCCGTGTTTCAGGATACGCTGTACGT 106691 | || | || |||||||| || || | || |||||||| || || ||||| |||||| Sbjct 562 ATGGAAAACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGT 621 Query 106692 TTTAATGCACTGACGCGTGAACAACAGAACGACGTTATTAGTCGTACATTTACTCAGGCG 106751 ||||| | ||||| ||||| ||| | || ||||||| ||||| || |||||| | Sbjct 622 TTTAACTCCCTGACCAAAGAACAGCAGCAGGATGTTATTACCCGTACCTTCACTCAGACC 681 Query 106752 ATGTAAT 106758 ||||||| Sbjct 682 ATGTAAT 688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357355421509664