Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq3869 136 4e-27 >seq3869 Length=8584 Score = 136 bits (150), Expect = 4e-27 Identities = 275/408 (67%), Gaps = 0/408 (0%) Strand=Plus/Plus Query 143911 CATAAGGTCGTTCATCTGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACC 143970 ||| || | ||| ||||| | ||||||||||| || |||| ||||| | ||| ||| Sbjct 4353 CATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACC 4412 Query 143971 TTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 144030 |||||||||||| || ||||| |||| ||||||| |||||| || || || | Sbjct 4413 ACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAG 4472 Query 144031 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 144090 || || |||||||| || | || || || || || ||||| || || ||||||||||| Sbjct 4473 GGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATG 4532 Query 144091 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 144150 || |||| ||||| ||||| || | ||||||| || || | || Sbjct 4533 CTTGTAGAACGGAATGCAGCCGGTGTGGAAGGCTTCGCCGCCGCGGATCGGGCTGCCCAG 4592 Query 144151 AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTAT 144210 || ||||| || ||||||| || || ||||| || | |||| ||||| | || Sbjct 4593 CGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAAT 4652 Query 144211 TGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGA 144270 | | | | || ||| || || | ||| |||||| || || | ||| || || Sbjct 4653 CGCGCTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGA 4712 Query 144271 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGG 144318 || || ||||||||||| ||||| | || | ||| || || || || Sbjct 4713 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGG 4760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545365906538040