Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq4092 145 6e-30 seq46 84.2 2e-11 >seq4092 Length=20610 Score = 145 bits (160), Expect = 6e-30 Identities = 284/417 (68%), Gaps = 2/417 (0%) Strand=Plus/Plus Query 51274 TCTGCCTGTTTTCCCGCGTTGAATGGTCTGGCATCCGGGTTTCCTAAGTAACCACAAACC 51333 ||| |||| || || |||||||| || | || |||||| | || | ||||| || ||| Sbjct 16064 TCTTCCTGCTTGCCGGCGTTGAACGGCCGCGCGTCCGGGCTGCCGAGATAACCGCACACC 16123 Query 51334 CTGCGAGTGACAGAGCAGCTTTCTTTGTCGTTATTACCACACTTAGGGCACTTGAAACCT 51393 | ||| || || || || | ||||| ||||| || || ||||| | || || Sbjct 16124 CGGCGGGTAACGGAAACGCGGGCGGCGTCGTGGTTACCGCATTTCGGGCAGGTAAAGCCC 16183 Query 51394 TCCGAGGTGCATAGGAACTCTCCTTTATACCCGCACTTAAAGCACTCGTCTATTGGGGTG 51453 | |||||| |||||| || || | ||||||| ||||||| || || || || Sbjct 16184 TTGCTGGTGCACTCGAACTCGCCGGTAAAACCGCACTCGTAGCACTCATCGATCGGCGTA 16243 Query 51454 TTAGTACCATAATACGGTACTTGATAGTACGCGTAATTCCACACATCTTCCAATGCTTCT 51513 || || || || ||||| || || | || ||||| |||||| ||||||| || | Sbjct 16244 TTGGTCCCGTAGTACGGCACGTGCTGATAGCTGTAATCCCACACGTCTTCCAGCGCCTTG 16303 Query 51514 ATGTTATTAATCATAGAAGGGAATTCCCCGTAACATATGTGGCCGCCCGCTGAGTAG-GG 51572 | ||||| ||| ||| | || ||||| || ||| || |||| || || || Sbjct 16304 AGGTTATGCTGGATATTCGGGTACTCGCCGTAGCAAATGAACCC-CCCGTTGGCCAGCGG 16362 Query 51573 TACGAACTGCGCTTCAAAATCGATCTTCTCGTAAGGTGTTACTTTCTTGGCTACGTCTAG 51632 | || ||||||| ||||||||||| ||||| || | || ||||| | ||||| || Sbjct 16363 CGGGTACGGCGCTTCGAAATCGATCTTATCGTACGGGTTGACCTTCTTCTCCACGTCGAG 16422 Query 51633 GTGGAATGAGTTGGTCAGGTATCCTTTATCTGTGACACCTTCAAACTCCCCATACTC 51689 |||||| |||||| ||| ||||| || || || ||||| | | | ||| |||| Sbjct 16423 GTGGAAGCTGTTGGTGTAGTAACCTTTGTCGGTTACCCCTTCCACCACGCCAAACTC 16479 >seq46 Length=971285 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 40658 AGCTATGGCGTCCTAGAGAGGATTTGAACCTCTGACCTCTCCCTTAGGAGGGGAGCGCTC 40717 || ||||||| | || |||||| |||||| |||||||| |||| |||||| ||||||| Sbjct 627754 AGATATGGCGCACCCGACAGGATTCGAACCTGTGACCTCTGCCTTCGGAGGGCAGCGCTC 627695 Query 40718 TATCCTGCTGAGCTAC 40733 ||||| |||||||||| Sbjct 627694 TATCCAGCTGAGCTAC 627679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371388992067553