Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq3869 91.5 2e-13 >seq3869 Length=8584 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 141384 GATTTCGTCGAATACCTTCGCCGGGTCTGTATAGAGATTTCGCATGATGTGTGTATAAGA 141443 ||| |||||||| || |||||||||| | || || || |||||||| || || || Sbjct 2572 GATGTCGTCGAACACGGTCGCCGGGTCGTTGACGATGTTGCGGATGATGTGAGTGTACGA 2631 Query 141444 ACGAGAGTGAATTGTCTCGCTGAATGTCCAGGTCTGAATCCATGTATCAAGACTCGGGTC 141503 ||| |||||||| |||||| ||| | |||||| | | ||| || || || |||| Sbjct 2632 ACGCGAGTGAATGGTCTCGGAGAAGGCCCAGGTTTCTACCCAGGTCTCCAGCTCCGGGAT 2691 Query 141504 AGAAACTAATGCGGCT--AATGCTGCAGCTGGAGCACGACCCTGGATACTATCCAGAAGT 141561 || | | ||||| || || || || ||| |||||||| || || || Sbjct 2692 GGAGATCA--GCGGCAGCAACGCCACATTCGGGCTACGGCCCTGGATGGAGTCGAGCAGC 2749 Query 141562 GATTGGTACTTCAGGTTATTGGTAAAAATATTTTGTTGATGTTCAGGAAGC 141612 | |||||||||||||| || | ||||||| || || |||||| || ||| Sbjct 2750 GTCTGGTACTTCAGGTTGCTGATGAAAATATGTTTTTCATGTTCCGGCAGC 2800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546309573459440