Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq19823 120 1e-22 >seq19823 Length=496 Score = 120 bits (132), Expect = 1e-22 Identities = 325/486 (67%), Gaps = 30/486 (6%) Strand=Plus/Minus Query 55484 GAGTTCGACCGCTACCTCGTCGAATTGCGCTGGGCGCAGCGGTTCGCG-TACTACAACCG 55542 |||||| ||||||| || || |||| ||||| |||| |||||| | || ||||| Sbjct 493 GAGTTCACCCGCTACATCCGGGAGCTGCGGTGGGCCCAGCACTTCGCGCTGCTG-AACCG 435 Query 55543 CGCCGAGATGATGGACCG----ATTCGCGCAGGCGTTCAATCATTGGATCGGCGCGCC-C 55597 | ||||||||||| || || || ||||| || ||| | || | Sbjct 434 GGAGGAGATGATGGATCGCGTCATCCG-GCAGGTGT-------------CGGAGTTCCTC 389 Query 55598 GGCTACCCGGCCGAGACGATCGTCGAGACCATCAACGCGCACCACAACTACACGCAGAAG 55657 || ||||| ||| ||| | ||| ||||||| |||||||||| ||| || | Sbjct 388 GGAACCCCGGTCGA--CGAACAG-GAGCGCATCAACTGCCACCACAACTTCACCGAGTCG 332 Query 55658 GAGCAGCACGGCGGCCGTGATGTGTGGCTGACCCGCAAGGGCGCGATCGACGCGAACGAG 55717 ||| ||||| ||| | |||||| || | || ||||| || ||| | ||| ||| Sbjct 331 GAGAAGCACTACGGGAAGCAGGTGTGGGTGTCACGGAAGGGAGCCATCCAGGCGGACGCC 272 Query 55718 GGTGTGCGGGGCCTGATTCCGGGCTCGATGGGCACCTGTTCGTATGTCGTG-ACCGGCAA 55776 ||| | |||||| || || || |||||||| ||| || || || ||| | ||| Sbjct 271 GGTCGACCGGGCCTCATCCCCGGGTCGATGGGGACCGCCTCTTACGTGGTGGAAGGGCTC 212 Query 55777 GGGTAATCCCG-AGGCGTTGTGCTCAGCGCCGCACGGTGCGGGCCGCCGGTTCTCGCGCA 55835 || | |||| || || || ||| | ||||||||||| || || || ||| ||| Sbjct 211 GGCGA--CCCGCAGTCGCTGAACTCCTCCCCGCACGGTGCCGGACGGGAGTACTCCCGCT 154 Query 55836 CGAAGGCGCGCAAGCTGTTCACGGTCGACGACCT-CGAGGCGCGTATGCAGGGCATCGAG 55894 || |||||| | |||||| |||| | || |||| ||| ||| |||||||||| Sbjct 153 CGGCGGCGCGGCGGACCTTCACGCACGACCAGCTGCGAGAGGCG-ATGACGGGCATCGAG 95 Query 55895 TACCGCAAGGGCGAGGCGTGGGTCGACGAGATTCCCGACGCATACAAGCCGATCGACGTC 55954 | ||| | ||| || | |||||||||| || | || ||||||||||||||| Sbjct 94 TTCCGTGACACCGATGCCTTCATCGACGAGATCCCGCAGGCGTACAAGCCGATCGACCAG 35 Query 55955 GTGATG 55960 |||||| Sbjct 34 GTGATG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193762229970554